SCOPe 2.08: Species: Vibrio cholerae [TaxId: 345073]

Lineage for Species: Vibrio cholerae [TaxId: 345073]

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.72: Ribokinase-like [53612] (3 superfamilies)
core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
potential superfamily: members of this fold have similar functions but different ATP-binding sites

Superfamily c.72.1: Ribokinase-like [53613] (6 families)
has extra strand located between strands 2 and 3
Family c.72.1.0: automated matches [191321] (1 protein)
not a true family
Protein automated matches [190117] (50 species)
not a true protein
Species Vibrio cholerae [TaxId:345073] [269172] (7 PDB entries)

PDB entries in Species: Vibrio cholerae [TaxId: 345073]:

Domain(s) for 4xck:
1. Domain d4xcka_: 4xck A: [269173]
  automated match to d1rk2b_
  complexed with adp, cs, rib
2. Domain d4xckb_: 4xck B: [269178]
  automated match to d1rk2b_
  complexed with adp, cs, rib
3. Domain d4xckc_: 4xck C: [269175]
  automated match to d1rk2b_
  complexed with adp, cs, rib
4. Domain d4xckd_: 4xck D: [269182]
  automated match to d1rk2b_
  complexed with adp, cs, rib
Domain(s) for 4xda:
1. Domain d4xdaa_: 4xda A: [270119]
  automated match to d1rk2b_
  complexed with adp, na, rib
2. Domain d4xdab_: 4xda B: [270121]
  automated match to d1rk2b_
  complexed with adp, na, rib
3. Domain d4xdac_: 4xda C: [270120]
  automated match to d1rk2b_
  complexed with adp, na, rib
4. Domain d4xdad_: 4xda D: [270124]
  automated match to d1rk2b_
  complexed with adp, na, rib
Domain(s) for 5ey7:
1. Domain d5ey7a_: 5ey7 A: [326631]
  automated match to d1v1aa_
  complexed with na
2. Domain d5ey7b_: 5ey7 B: [326632]
  automated match to d1v1aa_
  complexed with na
Domain(s) for 5eyn:
- Domain d5eyna_: 5eyn A: [326738]
  automated match to d1v1aa_
  complexed with adp, bef, ca, fru, na
Domain(s) for 5f0z:
- Domain d5f0za_: 5f0z A: [326766]
  automated match to d1v1aa_
  complexed with adp, ca, fru, na
Domain(s) for 5f11:
- Domain d5f11a_: 5f11 A: [326753]
  automated match to d1v1aa_
  complexed with fru, na
Domain(s) for 5ygg:
- Domain d5ygga_: 5ygg A: [358150]
  automated match to d5f0za_
  complexed with adp, ca, fru, k; mutant

More info for Species Vibrio cholerae [TaxId:345073] from c.72.1.0 automated matches

Timeline for Species Vibrio cholerae [TaxId:345073] from c.72.1.0 automated matches:

Species Vibrio cholerae [TaxId:345073] from c.72.1.0 automated matches first appeared in SCOPe 2.05
Species Vibrio cholerae [TaxId:345073] from c.72.1.0 automated matches appears in SCOPe 2.07