Lineage for Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2826026Superfamily c.1.1: Triosephosphate isomerase (TIM) [51351] (2 families) (S)
  5. 2826483Family c.1.1.0: automated matches [191424] (1 protein)
    not a true family
  6. 2826484Protein automated matches [190605] (25 species)
    not a true protein
  7. 2826605Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [268515] (8 PDB entries)

PDB entries in Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]:

  1. Domain(s) for 4obt:
    1. 2826612Domain d4obta1: 4obt A:3-251 [280464]
      Other proteins in same PDB: d4obta2, d4obtb2
      automated match to d1tmha_
    2. 2826613Domain d4obtb1: 4obt B:3-251 [280463]
      Other proteins in same PDB: d4obta2, d4obtb2
      automated match to d1tmha_
  2. Domain(s) for 4ohq:
    1. 2826619Domain d4ohqa_: 4ohq A: [268520]
      automated match to d1m6ja_
    2. 2826620Domain d4ohqb_: 4ohq B: [268516]
      automated match to d1m6ja_
  3. Domain(s) for 6nxq:
  4. Domain(s) for 6nxr:
  5. Domain(s) for 6nxs:
    1. 2826608Domain d6nxsa1: 6nxs A:3-250 [380422]
      Other proteins in same PDB: d6nxsa2, d6nxsb2
      automated match to d1tmha_
      complexed with na; mutant
    2. 2826609Domain d6nxsb1: 6nxs B:3-249 [380424]
      Other proteins in same PDB: d6nxsa2, d6nxsb2
      automated match to d1tmha_
      complexed with na; mutant
  6. Domain(s) for 6nxw:
    1. 2826614Domain d6nxwa1: 6nxw A:3-251 [380754]
      Other proteins in same PDB: d6nxwa2, d6nxwb2, d6nxwc2
      automated match to d1tmha_
      mutant
    2. 2826615Domain d6nxwb1: 6nxw B:3-251 [380779]
      Other proteins in same PDB: d6nxwa2, d6nxwb2, d6nxwc2
      automated match to d1tmha_
      mutant
    3. 2826616Domain d6nxwc1: 6nxw C:1-251 [380726]
      Other proteins in same PDB: d6nxwa2, d6nxwb2, d6nxwc2
      automated match to d1tmha_
      mutant
    4. 2826617Domain d6nxwd_: 6nxw D: [380794]
      Other proteins in same PDB: d6nxwa2, d6nxwb2, d6nxwc2
      automated match to d1tmha_
      mutant
  7. Domain(s) for 6nxx:
    1. 2826610Domain d6nxxa_: 6nxx A: [380766]
      automated match to d1tmha_
      complexed with na; mutant
    2. 2826611Domain d6nxxb_: 6nxx B: [380759]
      automated match to d1tmha_
      complexed with na; mutant
  8. Domain(s) for 6nxy:

More info for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.1.1.0 automated matches

Timeline for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.1.1.0 automated matches: