Lineage for Species: Novosphingobium aromaticivorans [TaxId: 279238]

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2419618Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families) (S)
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
  5. 2420241Family c.1.9.0: automated matches [191327] (1 protein)
    not a true family
  6. 2420242Protein automated matches [190150] (26 species)
    not a true protein
  7. 2420355Species Novosphingobium aromaticivorans [TaxId:279238] [267952] (6 PDB entries)

PDB entries in Species: Novosphingobium aromaticivorans [TaxId: 279238]:

  1. Domain(s) for 4inf:
    1. 2420360Domain d4infa_: 4inf A: [266458]
      automated match to d3s4ta_
      complexed with ca, cl, gol, oxd
    2. 2420361Domain d4infb_: 4inf B: [266459]
      automated match to d3s4ta_
      complexed with ca, cl, gol, oxd
    3. 2420362Domain d4infc_: 4inf C: [266460]
      automated match to d3s4ta_
      complexed with ca, cl, gol, oxd
    4. 2420363Domain d4infd_: 4inf D: [266461]
      automated match to d3s4ta_
      complexed with ca, cl, gol, oxd
  2. Domain(s) for 4ing:
    1. 2420372Domain d4inga_: 4ing A: [307545]
      automated match to d4infa_
      complexed with 1df, ca, cl
    2. 2420373Domain d4ingb_: 4ing B: [307546]
      automated match to d4infa_
      complexed with 1df, ca, cl
  3. Domain(s) for 4qrn:
    1. 2420356Domain d4qrna1: 4qrn A:1-351 [300543]
      Other proteins in same PDB: d4qrna2
      automated match to d4infa_
      complexed with 1df, act, cl, gol, mn
    2. 2420357Domain d4qrnb_: 4qrn B: [267339]
      Other proteins in same PDB: d4qrna2
      automated match to d3s4ta_
      complexed with 1df, act, cl, gol, mn
    3. 2420358Domain d4qrnc_: 4qrn C: [267340]
      Other proteins in same PDB: d4qrna2
      automated match to d3s4ta_
      complexed with 1df, act, cl, gol, mn
    4. 2420359Domain d4qrnd_: 4qrn D: [267341]
      Other proteins in same PDB: d4qrna2
      automated match to d3s4ta_
      complexed with 1df, act, cl, gol, mn
  4. Domain(s) for 4qs5:
    1. 2420368Domain d4qs5a_: 4qs5 A: [267342]
      automated match to d3s4ta_
      complexed with 1df, act, cl, gol, mn; mutant
    2. 2420369Domain d4qs5b_: 4qs5 B: [267343]
      automated match to d3s4ta_
      complexed with 1df, act, cl, gol, mn; mutant
    3. 2420370Domain d4qs5c_: 4qs5 C: [267344]
      automated match to d3s4ta_
      complexed with 1df, act, cl, gol, mn; mutant
    4. 2420371Domain d4qs5d_: 4qs5 D: [267345]
      automated match to d3s4ta_
      complexed with 1df, act, cl, gol, mn; mutant
  5. Domain(s) for 4qs6:
    1. 2420366Domain d4qs6a_: 4qs6 A: [267346]
      automated match to d3s4ta_
      complexed with 1df, cl, gol; mutant
    2. 2420367Domain d4qs6b_: 4qs6 B: [267347]
      automated match to d3s4ta_
      complexed with 1df, cl, gol; mutant
  6. Domain(s) for 4qtg:
    1. 2420364Domain d4qtga_: 4qtg A: [267365]
      automated match to d3s4ta_
      complexed with gol, mn
    2. 2420365Domain d4qtgb_: 4qtg B: [267366]
      automated match to d3s4ta_
      complexed with gol, mn

More info for Species Novosphingobium aromaticivorans [TaxId:279238] from c.1.9.0 automated matches

Timeline for Species Novosphingobium aromaticivorans [TaxId:279238] from c.1.9.0 automated matches: