Lineage for Species: Vibrio harveyi [TaxId: 673519]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2086988Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families) (S)
    binds metal ion (magnesium or manganese) in conserved site inside barrel
    N-terminal alpha+beta domain is common to this superfamily
  5. 2087392Family c.1.11.0: automated matches [227196] (1 protein)
    not a true family
  6. 2087393Protein automated matches [226923] (73 species)
    not a true protein
  7. 2087996Species Vibrio harveyi [TaxId:673519] [267937] (3 PDB entries)

PDB entries in Species: Vibrio harveyi [TaxId: 673519]:

  1. Domain(s) for 4ggh:
    1. 2087997Domain d4ggha2: 4ggh A:116-399 [266297]
      Other proteins in same PDB: d4ggha1, d4gghb1, d4gghc1, d4gghd1
      automated match to d4ihca2
      complexed with cl, edo, epe, gol, mg
    2. 2087998Domain d4gghb2: 4ggh B:116-399 [266299]
      Other proteins in same PDB: d4ggha1, d4gghb1, d4gghc1, d4gghd1
      automated match to d4ihca2
      complexed with cl, edo, epe, gol, mg
    3. 2087999Domain d4gghc2: 4ggh C:116-399 [266301]
      Other proteins in same PDB: d4ggha1, d4gghb1, d4gghc1, d4gghd1
      automated match to d4ihca2
      complexed with cl, edo, epe, gol, mg
    4. 2088000Domain d4gghd2: 4ggh D:116-399 [266303]
      Other proteins in same PDB: d4ggha1, d4gghb1, d4gghc1, d4gghd1
      automated match to d4ihca2
      complexed with cl, edo, epe, gol, mg
  2. Domain(s) for 4gir:
    1. 2088001Domain d4gira2: 4gir A:116-399 [266311]
      Other proteins in same PDB: d4gira1, d4girb1, d4girb3, d4girc1, d4gird1, d4gird3
      automated match to d4ihca2
      complexed with cl, edo, mg, na, so4
    2. 2088002Domain d4girb2: 4gir B:116-399 [266313]
      Other proteins in same PDB: d4gira1, d4girb1, d4girb3, d4girc1, d4gird1, d4gird3
      automated match to d4ihca2
      complexed with cl, edo, mg, na, so4
    3. 2088003Domain d4girc2: 4gir C:116-399 [266315]
      Other proteins in same PDB: d4gira1, d4girb1, d4girb3, d4girc1, d4gird1, d4gird3
      automated match to d4ihca2
      complexed with cl, edo, mg, na, so4
    4. 2088004Domain d4gird2: 4gir D:116-399 [266317]
      Other proteins in same PDB: d4gira1, d4girb1, d4girb3, d4girc1, d4gird1, d4gird3
      automated match to d4ihca2
      complexed with cl, edo, mg, na, so4
  3. Domain(s) for 4gis:
    1. 2088005Domain d4gisa2: 4gis A:116-399 [266319]
      Other proteins in same PDB: d4gisa1, d4gisa3, d4gisb1, d4gisb3
      automated match to d4ihca2
      complexed with cl, gol, mae, mg, mla
    2. 2088006Domain d4gisb2: 4gis B:116-399 [266321]
      Other proteins in same PDB: d4gisa1, d4gisa3, d4gisb1, d4gisb3
      automated match to d4ihca2
      complexed with cl, gol, mae, mg, mla

More info for Species Vibrio harveyi [TaxId:673519] from c.1.11.0 automated matches

Timeline for Species Vibrio harveyi [TaxId:673519] from c.1.11.0 automated matches: