Class d: Alpha and beta proteins (a+b) [53931] (388 folds) |
Fold d.21: Diaminopimelate epimerase-like [54505] (1 superfamily) mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix |
Superfamily d.21.1: Diaminopimelate epimerase-like [54506] (5 families) duplication: consists of two similar domain swapped with C-terminal strands |
Family d.21.1.1: Diaminopimelate epimerase [54507] (2 proteins) automatically mapped to Pfam PF01678 |
Protein Diaminopimelate epimerase [54508] (3 species) |
Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [267831] (2 PDB entries) |
Domain d3ejxa1: 3ejx A:25-158 [264749] Other proteins in same PDB: d3ejxb3 automated match to d4ijza1 complexed with zdp |
Domain d3ejxa2: 3ejx A:159-311 [264750] Other proteins in same PDB: d3ejxb3 automated match to d4ijza2 complexed with zdp |
Domain d3ejxb1: 3ejx B:25-158 [264751] Other proteins in same PDB: d3ejxb3 automated match to d4ijza1 complexed with zdp |
Domain d3ejxb2: 3ejx B:159-311 [264752] Other proteins in same PDB: d3ejxb3 automated match to d4ijza2 complexed with zdp |
Domain d3ejxc1: 3ejx C:25-158 [264753] Other proteins in same PDB: d3ejxb3 automated match to d4ijza1 complexed with zdp |
Domain d3ejxc2: 3ejx C:159-311 [264754] Other proteins in same PDB: d3ejxb3 automated match to d4ijza2 complexed with zdp |
Domain d3ejxd1: 3ejx D:11-158 [291873] Other proteins in same PDB: d3ejxb3 automated match to d3ejxa1 complexed with zdp |
Domain d3ejxd2: 3ejx D:159-311 [291874] Other proteins in same PDB: d3ejxb3 automated match to d3ejxa2 complexed with zdp |
Domain d3ejxe1: 3ejx E:25-158 [264755] Other proteins in same PDB: d3ejxb3 automated match to d4ijza1 complexed with zdp |
Domain d3ejxe2: 3ejx E:159-311 [264756] Other proteins in same PDB: d3ejxb3 automated match to d4ijza2 complexed with zdp |
Domain d3ejxf1: 3ejx F:11-158 [291875] Other proteins in same PDB: d3ejxb3 automated match to d3ejxa1 complexed with zdp |
Domain d3ejxf2: 3ejx F:159-311 [291876] Other proteins in same PDB: d3ejxb3 automated match to d3ejxa2 complexed with zdp |
Domain d3ekma1: 3ekm A:25-158 [264757] automated match to d4ijza1 complexed with zdr |
Domain d3ekma2: 3ekm A:159-311 [264758] automated match to d4ijza2 complexed with zdr |
Domain d3ekmb1: 3ekm B:25-158 [264759] automated match to d4ijza1 complexed with zdr |
Domain d3ekmb2: 3ekm B:159-311 [264760] automated match to d4ijza2 complexed with zdr |
Domain d3ekmc1: 3ekm C:25-158 [264761] automated match to d4ijza1 complexed with zdr |
Domain d3ekmc2: 3ekm C:159-311 [264762] automated match to d4ijza2 complexed with zdr |
Domain d3ekmd1: 3ekm D:11-158 [291881] automated match to d3ejxa1 complexed with zdr |
Domain d3ekmd2: 3ekm D:159-311 [291882] automated match to d3ejxa2 complexed with zdr |
Domain d3ekme1: 3ekm E:25-158 [264763] automated match to d4ijza1 complexed with zdr |
Domain d3ekme2: 3ekm E:159-311 [264764] automated match to d4ijza2 complexed with zdr |
Domain d3ekmf1: 3ekm F:11-158 [291883] automated match to d3ejxa1 complexed with zdr |
Domain d3ekmf2: 3ekm F:159-311 [291884] automated match to d3ejxa2 complexed with zdr |
Timeline for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from d.21.1.1 Diaminopimelate epimerase: