Lineage for Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1898719Fold d.21: Diaminopimelate epimerase-like [54505] (1 superfamily)
    mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix
  4. 1898720Superfamily d.21.1: Diaminopimelate epimerase-like [54506] (5 families) (S)
    duplication: consists of two similar domain swapped with C-terminal strands
  5. 1898721Family d.21.1.1: Diaminopimelate epimerase [54507] (1 protein)
    automatically mapped to Pfam PF01678
  6. 1898722Protein Diaminopimelate epimerase [54508] (3 species)
  7. 1898745Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [267831] (2 PDB entries)

PDB entries in Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]:

  1. Domain(s) for 3ejx:
    1. 1898746Domain d3ejxa1: 3ejx A:25-158 [264749]
      automated match to d4ijza1
      complexed with zdp
    2. 1898747Domain d3ejxa2: 3ejx A:159-311 [264750]
      automated match to d4ijza2
      complexed with zdp
    3. 1898748Domain d3ejxb1: 3ejx B:25-158 [264751]
      automated match to d4ijza1
      complexed with zdp
    4. 1898749Domain d3ejxb2: 3ejx B:159-312 [264752]
      automated match to d4ijza2
      complexed with zdp
    5. 1898750Domain d3ejxc1: 3ejx C:25-158 [264753]
      automated match to d4ijza1
      complexed with zdp
    6. 1898751Domain d3ejxc2: 3ejx C:159-311 [264754]
      automated match to d4ijza2
      complexed with zdp
    7. 1898752Domain d3ejxe1: 3ejx E:25-158 [264755]
      automated match to d4ijza1
      complexed with zdp
    8. 1898753Domain d3ejxe2: 3ejx E:159-311 [264756]
      automated match to d4ijza2
      complexed with zdp
  2. Domain(s) for 3ekm:
    1. 1898754Domain d3ekma1: 3ekm A:25-158 [264757]
      automated match to d4ijza1
      complexed with zdr
    2. 1898755Domain d3ekma2: 3ekm A:159-311 [264758]
      automated match to d4ijza2
      complexed with zdr
    3. 1898756Domain d3ekmb1: 3ekm B:25-158 [264759]
      automated match to d4ijza1
      complexed with zdr
    4. 1898757Domain d3ekmb2: 3ekm B:159-311 [264760]
      automated match to d4ijza2
      complexed with zdr
    5. 1898758Domain d3ekmc1: 3ekm C:25-158 [264761]
      automated match to d4ijza1
      complexed with zdr
    6. 1898759Domain d3ekmc2: 3ekm C:159-311 [264762]
      automated match to d4ijza2
      complexed with zdr
    7. 1898760Domain d3ekme1: 3ekm E:25-158 [264763]
      automated match to d4ijza1
      complexed with zdr
    8. 1898761Domain d3ekme2: 3ekm E:159-311 [264764]
      automated match to d4ijza2
      complexed with zdr

More info for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from d.21.1.1 Diaminopimelate epimerase

Timeline for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from d.21.1.1 Diaminopimelate epimerase: