Lineage for Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2470823Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 2470824Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 2472162Family c.67.1.0: automated matches [191328] (1 protein)
    not a true family
  6. 2472163Protein automated matches [190151] (141 species)
    not a true protein
  7. 2473128Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [267816] (20 PDB entries)

PDB entries in Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]:

  1. Domain(s) for 2z1z:
    1. 2473147Domain d2z1za_: 2z1z A: [264626]
      automated match to d4my5a_
      complexed with mlt, plp
    2. 2473148Domain d2z1zb_: 2z1z B: [264627]
      automated match to d4my5a_
      complexed with mlt, plp
  2. Domain(s) for 2z20:
    1. 2473139Domain d2z20a1: 2z20 A:19-426 [304796]
      Other proteins in same PDB: d2z20a2, d2z20b2
      automated match to d3ei5a_
      complexed with gol, plp, so4
    2. 2473140Domain d2z20b1: 2z20 B:19-426 [304798]
      Other proteins in same PDB: d2z20a2, d2z20b2
      automated match to d3ei5a_
      complexed with gol, plp, so4
  3. Domain(s) for 3ei5:
    1. 2473141Domain d3ei5a_: 3ei5 A: [264748]
      Other proteins in same PDB: d3ei5b2
      automated match to d4my5a_
      complexed with gol, pgu, so4
    2. 2473142Domain d3ei5b1: 3ei5 B:19-426 [291844]
      Other proteins in same PDB: d3ei5b2
      automated match to d3ei5a_
      complexed with gol, pgu, so4
  4. Domain(s) for 3ei6:
    1. 2473135Domain d3ei6a1: 3ei6 A:19-426 [305264]
      Other proteins in same PDB: d3ei6a2, d3ei6b2
      automated match to d3ei5a_
      complexed with gol, pl4, so4
    2. 2473136Domain d3ei6b1: 3ei6 B:19-426 [305266]
      Other proteins in same PDB: d3ei6a2, d3ei6b2
      automated match to d3ei5a_
      complexed with gol, pl4, so4
  5. Domain(s) for 3ei7:
    1. 2473143Domain d3ei7a1: 3ei7 A:19-426 [305268]
      Other proteins in same PDB: d3ei7a2, d3ei7b2
      automated match to d3ei5a_
      complexed with so4
    2. 2473144Domain d3ei7b1: 3ei7 B:19-426 [305270]
      Other proteins in same PDB: d3ei7a2, d3ei7b2
      automated match to d3ei5a_
      complexed with so4
  6. Domain(s) for 3ei8:
    1. 2473131Domain d3ei8a1: 3ei8 A:19-426 [305272]
      Other proteins in same PDB: d3ei8a2, d3ei8b2
      automated match to d3ei5a_
      complexed with gol, pl5, plp, so4
    2. 2473132Domain d3ei8b1: 3ei8 B:19-426 [305274]
      Other proteins in same PDB: d3ei8a2, d3ei8b2
      automated match to d3ei5a_
      complexed with gol, pl5, plp, so4
  7. Domain(s) for 3ei9:
    1. 2473129Domain d3ei9a1: 3ei9 A:19-426 [305276]
      Other proteins in same PDB: d3ei9a2, d3ei9b2
      automated match to d3ei5a_
      complexed with gol, pl6, so4
    2. 2473130Domain d3ei9b1: 3ei9 B:19-426 [305278]
      Other proteins in same PDB: d3ei9a2, d3ei9b2
      automated match to d3ei5a_
      complexed with gol, pl6, so4
  8. Domain(s) for 3eia:
    1. 2473137Domain d3eiaa1: 3eia A:19-426 [305280]
      Other proteins in same PDB: d3eiaa2, d3eiab2
      automated match to d3ei5a_
      complexed with pl6, so4
    2. 2473138Domain d3eiab1: 3eia B:19-426 [305282]
      Other proteins in same PDB: d3eiaa2, d3eiab2
      automated match to d3ei5a_
      complexed with pl6, so4
  9. Domain(s) for 3eib:
    1. 2473133Domain d3eiba1: 3eib A:19-426 [305284]
      Other proteins in same PDB: d3eiba2, d3eibb2
      automated match to d3ei5a_
      complexed with gol, plp, so4
    2. 2473134Domain d3eibb1: 3eib B:19-426 [305286]
      Other proteins in same PDB: d3eiba2, d3eibb2
      automated match to d3ei5a_
      complexed with gol, plp, so4
  10. Domain(s) for 3hbx:
    1. 2473149Domain d3hbxa_: 3hbx A: [344776]
      automated match to d5gp4c_
    2. 2473150Domain d3hbxb_: 3hbx B: [344777]
      automated match to d5gp4c_
    3. 2473151Domain d3hbxc_: 3hbx C: [344778]
      automated match to d5gp4c_
    4. 2473152Domain d3hbxd_: 3hbx D: [344779]
      automated match to d5gp4c_
    5. 2473153Domain d3hbxe_: 3hbx E: [344780]
      automated match to d5gp4c_
    6. 2473154Domain d3hbxf_: 3hbx F: [344781]
      automated match to d5gp4c_
  11. Domain(s) for 4fl0:
    1. 2473145Domain d4fl0a_: 4fl0 A: [266261]
      automated match to d4my5a_
      complexed with plp
    2. 2473146Domain d4fl0b_: 4fl0 B: [266262]
      automated match to d4my5a_
      complexed with plp
  12. Domain(s) for 5wmh:
    1. 3055770Domain d5wmhe_: 5wmh E: [355832]
      automated match to d1j32a_
      complexed with plp
    2. 3055771Domain d5wmhb_: 5wmh B: [355833]
      automated match to d1j32a_
      complexed with plp
    3. 3055775Domain d5wmhf_: 5wmh F: [355837]
      automated match to d1j32a_
      complexed with plp
    4. 3055776Domain d5wmhd_: 5wmh D: [355838]
      automated match to d1j32a_
      complexed with plp
    5. 3055786Domain d5wmha_: 5wmh A: [355848]
      automated match to d1j32a_
      complexed with plp
    6. 3055792Domain d5wmhc_: 5wmh C: [355854]
      automated match to d1j32a_
      complexed with plp
  13. Domain(s) for 5wmi:
  14. Domain(s) for 5wmk:
  15. Domain(s) for 5wml:
    1. 3055780Domain d5wmlb_: 5wml B: [355843]
      automated match to d1j32a_
      complexed with glu, pmp; mutant
    2. 3055781Domain d5wmla_: 5wml A: [355842]
      automated match to d1j32a_
      complexed with glu, pmp; mutant
  16. Domain(s) for 6czx:
    1. 3052317Domain d6czxc1: 6czx C:72-430 [352379]
      Other proteins in same PDB: d6czxa2, d6czxb2, d6czxc2, d6czxd2
      automated match to d3m5ua_
      complexed with mrd, peg, so4
    2. 3052327Domain d6czxb1: 6czx B:72-430 [352389]
      Other proteins in same PDB: d6czxa2, d6czxb2, d6czxc2, d6czxd2
      automated match to d3m5ua_
      complexed with mrd, peg, so4
    3. 3052348Domain d6czxd1: 6czx D:72-430 [352410]
      Other proteins in same PDB: d6czxa2, d6czxb2, d6czxc2, d6czxd2
      automated match to d3m5ua_
      complexed with mrd, peg, so4
    4. 3052461Domain d6czxa1: 6czx A:72-430 [352523]
      Other proteins in same PDB: d6czxa2, d6czxb2, d6czxc2, d6czxd2
      automated match to d3m5ua_
      complexed with mrd, peg, so4
  17. Domain(s) for 6czy:
    1. 3052333Domain d6czyd1: 6czy D:72-430 [352395]
      Other proteins in same PDB: d6czya2, d6czyb2, d6czyc2, d6czyd2
      automated match to d3m5ua_
      complexed with mpd, na, peg, pmp, so4
    2. 3052395Domain d6czya1: 6czy A:72-430 [352457]
      Other proteins in same PDB: d6czya2, d6czyb2, d6czyc2, d6czyd2
      automated match to d3m5ua_
      complexed with mpd, na, peg, pmp, so4
    3. 3052425Domain d6czyc1: 6czy C:72-430 [352487]
      Other proteins in same PDB: d6czya2, d6czyb2, d6czyc2, d6czyd2
      automated match to d3m5ua_
      complexed with mpd, na, peg, pmp, so4
    4. 3052452Domain d6czyb1: 6czy B:72-430 [352514]
      Other proteins in same PDB: d6czya2, d6czyb2, d6czyc2, d6czyd2
      automated match to d3m5ua_
      complexed with mpd, na, peg, pmp, so4
  18. Domain(s) for 6czz:
    1. 3052324Domain d6czza1: 6czz A:72-430 [352386]
      Other proteins in same PDB: d6czza2, d6czzb2, d6czzc2, d6czzd2
      automated match to d3m5ua_
      complexed with na, plp, sep
    2. 3052332Domain d6czzc1: 6czz C:72-430 [352394]
      Other proteins in same PDB: d6czza2, d6czzb2, d6czzc2, d6czzd2
      automated match to d3m5ua_
      complexed with na, plp, sep
    3. 3052352Domain d6czzb1: 6czz B:72-430 [352414]
      Other proteins in same PDB: d6czza2, d6czzb2, d6czzc2, d6czzd2
      automated match to d3m5ua_
      complexed with na, plp, sep
    4. 3052594Domain d6czzd1: 6czz D:72-430 [352656]
      Other proteins in same PDB: d6czza2, d6czzb2, d6czzc2, d6czzd2
      automated match to d3m5ua_
      complexed with na, plp, sep
  19. Domain(s) for 6eei:
    1. 3057661Domain d6eeib_: 6eei B: [357723]
      automated match to d3rcha_
      complexed with phe, so4
    2. 3057664Domain d6eeia_: 6eei A: [357726]
      automated match to d3rcha_
      complexed with phe, so4
  20. Domain(s) for 6f5v:
    1. 3065684Domain d6f5vd_: 6f5v D: [365746]
      automated match to d1j32a_
      complexed with cit, na, plp
    2. 3065690Domain d6f5vc_: 6f5v C: [365752]
      automated match to d1j32a_
      complexed with cit, na, plp
    3. 3065758Domain d6f5vb_: 6f5v B: [365820]
      automated match to d1j32a_
      complexed with cit, na, plp
    4. 3065781Domain d6f5va_: 6f5v A: [365843]
      automated match to d1j32a_
      complexed with cit, na, plp

More info for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.67.1.0 automated matches

Timeline for Species Thale cress (Arabidopsis thaliana) [TaxId:3702] from c.67.1.0 automated matches: