Lineage for Species: Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId: 11698]
- Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds) 
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the restSuperfamily c.55.3: Ribonuclease H-like [53098] (18 families) 
consists of one domain of this fold
Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (2 proteins)
Pfam PF00665Protein Retroviral integrase, catalytic domain [53108] (5 species) 
Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] [267758] (4 PDB entries)
PDB entries in Species: Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId: 11698]:
- Domain(s) for 4dmn:
Domain d4dmna_: 4dmn A: [219865]
automated match to d4gw6a_
complexed with 0l9, ars, so4
- Domain(s) for 4gvm:
Domain d4gvma_: 4gvm A: [197016]
automated match to d1bl3c_
complexed with ars, lf2; mutant
- Domain(s) for 4gw6:
Domain d4gw6a_: 4gw6 A: [197017]
automated match to d1bl3c_
complexed with ars, lf2
- Domain(s) for 4id1:
Domain d4id1a_: 4id1 A: [197249]
automated match to d1bl3c_
complexed with lf0, so4
More info for Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] from c.55.3.2 Retroviral integrase, catalytic domain
Timeline for Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] from c.55.3.2 Retroviral integrase, catalytic domain:
- Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] from c.55.3.2 Retroviral integrase, catalytic domain first appeared in SCOPe 2.05
- Species Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId:11698] from c.55.3.2 Retroviral integrase, catalytic domain appears in SCOPe 2.07