SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.123: CoA-transferase family III (CaiB/BaiF) [89795] (1 superfamily)
consist of two different alpha/beta domains; N-terminal domain has a SurE-like topology with a left-handed beta-alpha-beta unit

Superfamily c.123.1: CoA-transferase family III (CaiB/BaiF) [89796] (2 families)
Family c.123.1.0: automated matches [267628] (1 protein)
not a true family
Protein automated matches [267679] (4 species)
not a true protein

Species:

Acetobacter aceti [TaxId:435] [267891] (1 PDB entry)
- Domains for 3ubm:
  1. Domain d3ubma_: 3ubm A: [265509]
    automated match to d2vjqa_
    complexed with coa
  2. Domain d3ubmb_: 3ubm B: [265510]
    automated match to d2vjqa_
    complexed with coa
  3. Domain d3ubmc_: 3ubm C: [265511]
    automated match to d2vjqa_
    complexed with coa
  4. Domain d3ubmd_: 3ubm D: [265512]
    automated match to d2vjqa_
    complexed with coa
Brucella suis [TaxId:204722] [311374] (1 PDB entry)
- Domain for 4ed9:
  - Domain d4ed9a_: 4ed9 A: [307291]
    automated match to d4hl6b_
    complexed with edo, nhe, peg
Escherichia coli [TaxId:83333] [267944] (1 PDB entry)
- Domains for 4hl6:
  1. Domain d4hl6a_: 4hl6 A: [266339]
    automated match to d2yima_
  2. Domain d4hl6b_: 4hl6 B: [266340]
    automated match to d2yima_
  3. Domain d4hl6c_: 4hl6 C: [266341]
    automated match to d2yima_
  4. Domain d4hl6d_: 4hl6 D: [266342]
    automated match to d2yima_
  5. Domain d4hl6e_: 4hl6 E: [266343]
    automated match to d2yima_
  6. Domain d4hl6f_: 4hl6 F: [266344]
    automated match to d2yima_
Mycobacterium tuberculosis [TaxId:83332] [360005] (3 PDB entries)
1. Domains for 5yit:
  1. Domain d5yita_: 5yit A: [360062]
    automated match to d4ed9a_
  2. Domain d5yitb_: 5yit B: [360064]
    automated match to d4ed9a_
  3. Domain d5yitc_: 5yit C: [360006]
    automated match to d4ed9a_
  4. Domain d5yitd_: 5yit D: [360063]
    automated match to d4ed9a_
  5. Domain d5yite_: 5yit E: [360076]
    automated match to d4ed9a_
2. Domains for 5yiy:
  1. Domain d5yiya_: 5yiy A: [360034]
    automated match to d4ed9a_
    complexed with cl; mutant
  2. Domain d5yiyb_: 5yiy B: [360043]
    automated match to d4ed9a_
    complexed with cl; mutant
3. Domains for 5yx6:
  1. Domain d5yx6a_: 5yx6 A: [360103]
    automated match to d4ed9a_
    complexed with bam, gol
  2. Domain d5yx6b_: 5yx6 B: [360102]
    automated match to d4ed9a_
    complexed with bam, gol
  3. Domain d5yx6c_: 5yx6 C: [360033]
    automated match to d4ed9a_
    complexed with bam, gol
  4. Domain d5yx6d_: 5yx6 D: [360090]
    automated match to d4ed9a_
    complexed with bam, gol

More info for Protein automated matches from c.123.1.0: automated matches

Timeline for Protein automated matches from c.123.1.0: automated matches:

Protein automated matches from c.123.1.0: automated matches first appeared in SCOPe 2.05
Protein automated matches from c.123.1.0: automated matches appears in SCOPe 2.07