Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2489936Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
    core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest
  4. 2490288Superfamily c.97.3: JAB1/MPN domain [102712] (2 families) (S)
  5. 2490289Family c.97.3.1: JAB1/MPN domain [102713] (8 protein domains)
    Pfam PF01398; Pfam PF14464; synonyms Mov34, PAD-1. PubMed 17559875 asserts homology to (c.97.1)
  6. 2490344Protein automated matches [267675] (2 species)
    not a true protein

Species:

  1. 2490345Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [346341] (4 PDB entries)
    1. Domains for 4ocl:
      1. 2490348Domain d4oclb_: 4ocl B: [344006]
        Other proteins in same PDB: d4ocla_, d4oclc_, d4ocld_, d4oclf_
        automated match to d5w83b_
        complexed with zn
      2. 2490349Domain d4ocle_: 4ocl E: [344007]
        Other proteins in same PDB: d4ocla_, d4oclc_, d4ocld_, d4oclf_
        automated match to d5w83b_
        complexed with zn
    2. Domains for 4ocm:
      1. 2490346Domain d4ocmb_: 4ocm B: [344008]
        Other proteins in same PDB: d4ocma_, d4ocmc_, d4ocmd_, d4ocmf_
        automated match to d5w83b_
        complexed with k, zn
      2. 2490347Domain d4ocme_: 4ocm E: [344009]
        Other proteins in same PDB: d4ocma_, d4ocmc_, d4ocmd_, d4ocmf_
        automated match to d5w83b_
        complexed with k, zn
    3. Domains for 4ocn:
      1. 2490350Domain d4ocnb_: 4ocn B: [344010]
        Other proteins in same PDB: d4ocna_, d4ocnc_, d4ocnd_, d4ocnf_
        automated match to d5w83b_
      2. 2490351Domain d4ocne_: 4ocn E: [344011]
        Other proteins in same PDB: d4ocna_, d4ocnc_, d4ocnd_, d4ocnf_
        automated match to d5w83b_
    4. Domain for 4owp:
  2. 2490353Human (Homo sapiens) [TaxId:9606] [267818] (2 PDB entries)
    1. Domain for 2znr:
    2. Domains for 2znv:
      1. 2490355Domain d2znva_: 2znv A: [262244]
        Other proteins in same PDB: d2znvb_, d2znvc_, d2znve_, d2znvf_
        automated match to d3rzuc_
        complexed with edo, zn
      2. 2490356Domain d2znvd_: 2znv D: [262245]
        Other proteins in same PDB: d2znvb_, d2znvc_, d2znve_, d2znvf_
        automated match to d3rzuc_
        complexed with edo, zn

More info for Protein automated matches from c.97.3.1: JAB1/MPN domain

Timeline for Protein automated matches from c.97.3.1: JAB1/MPN domain: