SCOPe 2.05: Domain d4rkqb_: 4rkq B:

Lineage for d4rkqb_ (4rkq B:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.93: Periplasmic binding protein-like I [53821] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   parallel beta-sheet of 6 strands, order 213456

4. Superfamily c.93.1: Periplasmic binding protein-like I [53822] (2 families)
   Similar in architecture to the superfamily II but partly differs in topology

5. Family c.93.1.0: automated matches [191439] (1 protein)
   not a true family

6. Protein automated matches [190646] (60 species)
   not a true protein

7. Species Arthrobacter sp. [TaxId:290399] [260960] (2 PDB entries)

8. Domain d4rkqb_: 4rkq B: [267394]
   automated match to d4rkra_
   complexed with cl, edo, mg

Details for d4rkqb_

PDB Entry: 4rkq, 1.9 Å

PDB Description: crystal structure of laci family transcriptional regulator from arthrobacter sp. fb24, target efi-560007

PDB Compounds: (B:) Transcriptional regulator, LacI family

SCOPe Domain Sequences for d4rkqb_:

Sequence, based on SEQRES records:

>d4rkqb_ c.93.1.0 (B:) automated matches {Arthrobacter sp. [TaxId: 290399]}
artsvglaipdltnpyfpafassvvelatlrgwhvvvddyghggrsgldavehlapqvda
vigylggyadqaqtvlgrrplivldenpggaagsinfdyqhaakvavaqlmdskrqhiay
leagsasesdepvpctvrgkavagrldelgaswslivaeetaeaareaaaaflrehpetd
gilafndlmaagvlkalsgsgrrvpedcavigmdgiplgellspqlstmaldlrevgraa
vellvgllsgavtpgsqssrttlkhrlvlresteg

Sequence, based on observed residues (ATOM records):

>d4rkqb_ c.93.1.0 (B:) automated matches {Arthrobacter sp. [TaxId: 290399]}
artsvglaipdltnpyfpafassvvelatlrgwhvvvddyghggrsgldavehlapqvda
vigylggyadqaqtvlgrrplivldenpggaagsinfdyqhaakvavaqlmdskrqhiay
leagspvpctvrgkavagrldelgaswslivaeetaeaareaaaaflrehpetdgilafn
dlmaagvlkalsgsgrrvpedcavigmdgiplgellspqlstmaldlrevgraavellvg
llsgavtpgsqssrttlkhrlvlresteg

Timeline for d4rkqb_:

• d4rkqb_ is new in SCOPe 2.05-stable
  
• d4rkqb_ is called d4rkqb1 in SCOPe 2.06
  
• d4rkqb_ appears in the current release, SCOPe 2.08, called d4rkqb1