SCOPe 2.06: Domain d4otoa1: 4oto A:231-720

Lineage for d4otoa1 (4oto A:231-720)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.298: Left-handed alpha-alpha superhelix [267589] (1 superfamily)
   multihelical; 2 (curved) layers: alpha/alpha; left-handed superhelix

4. Superfamily a.298.1: TAL effector-like [267596] (1 family)
   Pfam PF03377; repeat; repeats form left-handed bundles that associate in a right-handed superstructure. PubMed 22223736

5. Family a.298.1.1: TAL (transcription activator-like) effector [267609] (5 proteins)
   this is a repeat family; one repeat unit is 4cj9 A:259-292 found in domain

6. Protein automated matches [267685] (1 species)
   not a true protein

7. Species Xanthomonas campestris [TaxId:329463] [267985] (16 PDB entries)

8. Domain d4otoa1: 4oto A:231-720 [267137]
   Other proteins in same PDB: d4otoa2, d4otob2
   automated match to d3v6ta_
   protein/DNA complex; mutant

Details for d4otoa1

PDB Entry: 4oto, 2.59 Å

PDB Description: Crystal structure of the S505W mutant of TAL effector dHax3

PDB Compounds: (A:) Hax3

SCOPe Domain Sequences for d4otoa1:

Sequence; same for both SEQRES and ATOM records:

>d4otoa1 a.298.1.1 (A:231-720) automated matches {Xanthomonas campestris [TaxId: 329463]}
qwsgaralealltvagelrgpplqldtgqllkiakrggvtaveavhawrnaltgaplnlt
peqvvaiashdggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllpv
lcqahgltpeqvvaiashdggkqaletvqallpvlcqahgltpeqvvaiasngggkqale
tvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasn
gggkqaletvqrllpvlcqahgltpqqvvaiasnwggkqaletvqrllpvlcqahgltpq
qvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllpvlc
qahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashdggkqaletv
qrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclg
grpaldavkk

Timeline for d4otoa1:

• d4otoa1 first appeared in SCOPe 2.05, called d4otoa_
  
• d4otoa1 appears in SCOPe 2.07
  
• d4otoa1 appears in the current release, SCOPe 2.08