Lineage for d4ot3b1 (4ot3 B:231-720)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2016947Fold a.298: Left-handed alpha-alpha superhelix [267589] (1 superfamily)
    multihelical; 2 (curved) layers: alpha/alpha; left-handed superhelix
  4. 2016948Superfamily a.298.1: TAL effector-like [267596] (1 family) (S)
    Pfam PF03377; repeat; repeats form left-handed bundles that associate in a right-handed superstructure. PubMed 22223736
  5. 2016949Family a.298.1.1: TAL (transcription activator-like) effector [267609] (5 protein domains)
  6. 2016965Protein automated matches [267685] (1 species)
    not a true protein
  7. 2016966Species Xanthomonas campestris [TaxId:329463] [267985] (16 PDB entries)
  8. 2016968Domain d4ot3b1: 4ot3 B:231-720 [267128]
    Other proteins in same PDB: d4ot3a2, d4ot3b2
    automated match to d3v6ta_
    protein/DNA complex; mutant

Details for d4ot3b1

PDB Entry: 4ot3 (more details), 1.94 Å

PDB Description: Crystal structure of the S505L mutant of TAL effector dHax3
PDB Compounds: (B:) Hax3

SCOPe Domain Sequences for d4ot3b1:

Sequence, based on SEQRES records: (download)

>d4ot3b1 a.298.1.1 (B:231-720) automated matches {Xanthomonas campestris [TaxId: 329463]}
qwsgaralealltvagelrgpplqldtgqllkiakrggvtaveavhawrnaltgaplnlt
peqvvaiashdggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllpv
lcqahgltpeqvvaiashdggkqaletvqallpvlcqahgltpeqvvaiasngggkqale
tvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasn
gggkqaletvqrllpvlcqahgltpqqvvaiasnlggkqaletvqrllpvlcqahgltpq
qvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllpvlc
qahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashdggkqaletv
qrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclg
grpaldavkk

Sequence, based on observed residues (ATOM records): (download)

>d4ot3b1 a.298.1.1 (B:231-720) automated matches {Xanthomonas campestris [TaxId: 329463]}
qwsgaralealltvagelrgpplqldtgqllkiakrggvtaveavhawrnaltgaplnlt
peqvvaiashdggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllpv
lcqahgltpeqvvaiashdggkqaletvqallpvlcqahgltpeqvvaiasngggkqale
tvqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasn
gggkqaletvqrllpvlcqahgltpqqvvaiasnlggkqaletvqrllpvlcqahgltpq
qvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllpvlc
qahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashdggkqaletv
qrllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpaaltndhlvalaclggr
paldavkk

SCOPe Domain Coordinates for d4ot3b1:

Click to download the PDB-style file with coordinates for d4ot3b1.
(The format of our PDB-style files is described here.)

Timeline for d4ot3b1:

  • d4ot3b1 first appeared in SCOPe 2.05, called d4ot3b_

View in 3D
Domains from same chain:
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d4ot3b2