SCOPe 2.08: Domain d4osib1: 4osi B:232-720

Lineage for d4osib1 (4osi B:232-720)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.298: Left-handed alpha-alpha superhelix [267589] (1 superfamily)
   multihelical; 2 (curved) layers: alpha/alpha; left-handed superhelix

4. Superfamily a.298.1: TAL effector-like [267596] (1 family)
   Pfam PF03377; repeat; repeats form left-handed bundles that associate in a right-handed superstructure. PubMed 22223736

5. Family a.298.1.1: TAL (transcription activator-like) effector [267609] (5 proteins)
   this is a repeat family; one repeat unit is 4cj9 A:259-292 found in domain

6. Protein automated matches [267685] (1 species)
   not a true protein

7. Species Xanthomonas campestris [TaxId:329463] [267985] (16 PDB entries)

8. Domain d4osib1: 4osi B:232-720 [267102]
   Other proteins in same PDB: d4osib2
   automated match to d3v6ta_
   protein/DNA complex

Details for d4osib1

PDB Entry: 4osi, 2.85 Å

PDB Description: Crystal structure of the TAL effector dHax3 with NI RVD at 2.8 angstrom resolution

PDB Compounds: (B:) Hax3

SCOPe Domain Sequences for d4osib1:

Sequence, based on SEQRES records:

>d4osib1 a.298.1.1 (B:232-720) automated matches {Xanthomonas campestris [TaxId: 329463]}
wsgaralealltvagelrgpplqldtgqllkiakrggvtaveavhawrnaltgaplnltp
eqvvaiashdggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllpvl
cqahgltpeqvvaiashdggkqaletvqallpvlcqahgltpeqvvaiasngggkqalet
vqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasng
ggkqaletvqrllpvlcqahgltpqqvvaiasniggkqaletvqrllpvlcqahgltpqq
vvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllpvlcq
ahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashdggkqaletvq
rllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdpalaaltndhlvalaclgg
rpaldavkk

Sequence, based on observed residues (ATOM records):

>d4osib1 a.298.1.1 (B:232-720) automated matches {Xanthomonas campestris [TaxId: 329463]}
wsgaralealltvagelrgpplqldtgqllkiakrggvtaveavhawrnaltgaplnltp
eqvvaiashdggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllpvl
cqahgltpeqvvaiashdggkqaletvqallpvlcqahgltpeqvvaiasngggkqalet
vqrllpvlcqahgltpqqvvaiasngggkqaletvqrllpvlcqahgltpqqvvaiasng
ggkqaletvqrllpvlcqahgltpqqvvaiasniggkqaletvqrllpvlcqahgltpqq
vvaiasngggkqaletvqrllpvlcqahgltpqqvvaiashdggkqaletvqrllpvlcq
ahgltpeqvvaiasngggkqaletvqrllpvlcqahgltpeqvvaiashdggkqaletvq
rllpvlcqahgltpqqvvaiasngggrpalesivaqlsrpdaltndhlvalaclggrpal
davkk

Timeline for d4osib1:

• d4osib1 first appeared in SCOPe 2.05, called d4osib_
  
• d4osib1 appears in SCOPe 2.07