Lineage for d4nq8b1 (4nq8 B:25-324)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2144291Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2144292Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2145531Family c.94.1.0: automated matches [191309] (1 protein)
    not a true family
  6. 2145532Protein automated matches [190039] (127 species)
    not a true protein
  7. 2145612Species Bordetella bronchiseptica [TaxId:257310] [267969] (3 PDB entries)
  8. 2145614Domain d4nq8b1: 4nq8 B:25-324 [266970]
    Other proteins in same PDB: d4nq8a2, d4nq8b2
    automated match to d4p47a_
    complexed with cl, paf, so4

Details for d4nq8b1

PDB Entry: 4nq8 (more details), 1.5 Å

PDB Description: Crystal structure of a trap periplasmic solute binding protein from Bordetella bronchispeptica (bb3421), target EFI-510039, with density modeled as pantoate
PDB Compounds: (B:) Putative periplasmic substrate-binding transport protein

SCOPe Domain Sequences for d4nq8b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4nq8b1 c.94.1.0 (B:25-324) automated matches {Bordetella bronchiseptica [TaxId: 257310]}

SCOPe Domain Coordinates for d4nq8b1:

Click to download the PDB-style file with coordinates for d4nq8b1.
(The format of our PDB-style files is described here.)

Timeline for d4nq8b1:

  • d4nq8b1 first appeared in SCOPe 2.05, called d4nq8b_

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