SCOPe 2.06: Domain d4ng7a1: 4ng7 A:30-327

Lineage for d4ng7a1 (4ng7 A:30-327)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.0: automated matches [191309] (1 protein)
   not a true family

6. Protein automated matches [190039] (140 species)
   not a true protein

7. Species Citrobacter koseri [TaxId:290338] [267974] (2 PDB entries)

8. Domain d4ng7a1: 4ng7 A:30-327 [266928]
   Other proteins in same PDB: d4ng7a2
   automated match to d4mcoc_

Details for d4ng7a1

PDB Entry: 4ng7, 2.3 Å

PDB Description: Crystal structure of a TRAP periplasmic solute binding protein from Citrobacter koseri (CKO_04899), Target EFI-510094, apo, open structure

PDB Compounds: (A:) TRAP periplasmic solute binding protein

SCOPe Domain Sequences for d4ng7a1:

Sequence, based on SEQRES records:

>d4ng7a1 c.94.1.0 (A:30-327) automated matches {Citrobacter koseri [TaxId: 290338]}
ikaadvhpqgypnvvavqkmgeklkqqtdgkleikvfpggvlgdekqmieqaqigaidmi
rvsmapvaailpdievftlpyvfrdedhmhkiidgdigksigdkltnnpksrlvflgwmd
sgtrnlitknpvekpedlhgmkirvqgspvaldtlkdmgansvamgvsevfsgmqtgvid
gaennpptfvahnympvaknytlsghfitpemllyskvkwdkltadeqqkiltlareaqf
eqrklwdaynqealakmkaggvqfheidkayfvkatepvraqygekhqalmkaiadvq

Sequence, based on observed residues (ATOM records):

>d4ng7a1 c.94.1.0 (A:30-327) automated matches {Citrobacter koseri [TaxId: 290338]}
ikaadvhpqgypnvvavqkmgeklkqqleikvfpggvlgdekqmieqaqigaidmirvsm
apvaailpdievftlpyvfrdedhmhkiidgdigksigdkltrlvflgwmdsgtrnlitk
npvekpedlhgmkirvqgspvaldtlkdmgansvamgvsevfsgmqtgvidgaennpptf
vahnympvaknytlsghfitpemllyskvkwdkltadeqqkiltlareaqfeqrklwday
nqealakmkaggvqfheidkayfvkatepvraqyhqalmkaiadvq

Timeline for d4ng7a1:

• d4ng7a1 first appeared in SCOPe 2.05, called d4ng7a_
  
• d4ng7a1 appears in SCOPe 2.07
  
• d4ng7a1 appears in the current release, SCOPe 2.08