Lineage for d4mw5b2 (4mw5 B:237-606)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2105373Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
    core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145
  4. 2105374Superfamily c.26.1: Nucleotidylyl transferase [52374] (6 families) (S)
  5. 2106026Family c.26.1.0: automated matches [191377] (1 protein)
    not a true family
  6. 2106027Protein automated matches [190459] (50 species)
    not a true protein
  7. 2106258Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [188998] (16 PDB entries)
  8. 2106268Domain d4mw5b2: 4mw5 B:237-606 [266808]
    Other proteins in same PDB: d4mw5a2, d4mw5b1, d4mw5b3
    automated match to d1rqga2
    protein/RNA complex; complexed with 415, dms, gol, met, so4

Details for d4mw5b2

PDB Entry: 4mw5 (more details), 2.35 Å

PDB Description: Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-{3-[(3-chloro-5-methoxybenzyl)amino]propyl}-3-phenylurea (Chem 1415)
PDB Compounds: (B:) Methionyl-tRNA synthetase

SCOPe Domain Sequences for d4mw5b2:

Sequence, based on SEQRES records: (download)

>d4mw5b2 c.26.1.0 (B:237-606) automated matches {Trypanosome (Trypanosoma brucei) [TaxId: 5691]}
kvekvffvtspiyyvnaaphighvystlitdvigryhrvkgervfaltgtdehgqkvaea
akqkqvspydfttavagefkkcfeqmdysidyfirttneqhkavvkelwtkleqkgdiyl
gryegwysisdesfltpqnitdgvdkdgnpckvslesghvvtwvseenymfrlsafrerl
lewyhanpgcivpefrrreviravekglpdlsvsraratlhnwaipvpgnpdhcvyvwld
altnyltgsrlrvdesgkevslvddfnelerfpadvhvigkdilkfhaiywpafllsagl
plpkkivahgwwtkdrkkiskslgnvfdpvekaeefgydalkyfllresgfsddgdysdk
nmiarlngel

Sequence, based on observed residues (ATOM records): (download)

>d4mw5b2 c.26.1.0 (B:237-606) automated matches {Trypanosome (Trypanosoma brucei) [TaxId: 5691]}
kvekvffvtspiyyvnaaphighvystlitdvigryhrvkgervfaltgtdehgqkvaea
akqkqvspydfttavagefkkcfeqmdysidyfirttneqhkavvkelwtkleqkgdiyl
gryegwysisdesfltpqnitdgvdkvslesghvvtwvseenymfrlsafrerllewyha
npgcivpefrrreviravekglpdlsvsraratlhnwaipvpgnpdhcvyvwldaltnyl
tgsrlrvdesgkevslvddfnelerfpadvhvigkdilkfhaiywpafllsaglplpkki
vahgwwtkdrkkiskslgnvfdpvekaeefgydalkyfllresgfsddgdysdknmiarl
ngel

SCOPe Domain Coordinates for d4mw5b2:

Click to download the PDB-style file with coordinates for d4mw5b2.
(The format of our PDB-style files is described here.)

Timeline for d4mw5b2: