SCOPe 2.08: Domain d4gghd2: 4ggh D:116-399

Lineage for d4gghd2 (4ggh D:116-399)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families)
   binds metal ion (magnesium or manganese) in conserved site inside barrel
   N-terminal alpha+beta domain is common to this superfamily

5. Family c.1.11.0: automated matches [227196] (1 protein)
   not a true family

6. Protein automated matches [226923] (79 species)
   not a true protein

7. Species Vibrio harveyi [TaxId:673519] [267937] (3 PDB entries)

8. Domain d4gghd2: 4ggh D:116-399 [266303]
   Other proteins in same PDB: d4ggha1, d4gghb1, d4gghc1, d4gghd1
   automated match to d4ihca2
   complexed with cl, edo, epe, gol, mg

Details for d4gghd2

PDB Entry: 4ggh, 1.9 Å

PDB Description: Crystal structure of an enolase family member from vibrio harveyi (efi-target 501692) with homology to mannonate dehydratase, with mg, hepes, and ethylene glycol bound (ordered loops, space group c2221)

PDB Compounds: (D:) Putative uncharacterized protein

SCOPe Domain Sequences for d4gghd2:

Sequence; same for both SEQRES and ATOM records:

>d4gghd2 c.1.11.0 (D:116-399) automated matches {Vibrio harveyi [TaxId: 673519]}
ksrdaiqvythatsdtmeglyeqvdkyleqgyqhircqlgfyggvpeniqtaqnptqgsy
ydqdqyientvemfknlrekygkqfhilhdvherlfpnqaiqfakqieqynpffiedilp
psqtewldnirnqssvslalgelfnnpeewkaliinrrvdfirchvsqiggitpalklgh
fcesfgvriawhcppdmtpigaavnthlnvhlhnaaiqehveykantqrvfpnaaeping
ylyaseiagigvemdreaaqdfpveyrphewtqsrlpdgsihtp

Timeline for d4gghd2:

• d4gghd2 first appeared in SCOPe 2.05
  
• d4gghd2 appears in SCOPe 2.07