SCOPe 2.06: Domain d4dm6a1: 4dm6 A:179-417

Lineage for d4dm6a1 (4dm6 A:179-417)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Retinoic acid receptor beta (RAR-beta) [117011] (2 species)

7. Species Human (Homo sapiens) [TaxId:9606] [117013] (2 PDB entries)
   Uniprot P10826 182-416

8. Domain d4dm6a1: 4dm6 A:179-417 [266157]
   Other proteins in same PDB: d4dm6a2
   complexed with ttb

Details for d4dm6a1

PDB Entry: 4dm6, 1.9 Å

PDB Description: Crystal structure of RARb LBD homodimer in complex with TTNPB

PDB Compounds: (A:) Retinoic acid receptor beta

SCOPe Domain Sequences for d4dm6a1:

Sequence; same for both SEQRES and ATOM records:

>d4dm6a1 a.123.1.1 (A:179-417) Retinoic acid receptor beta (RAR-beta) {Human (Homo sapiens) [TaxId: 9606]}
syemtaelddltekirkahqetfpslcqlgkyttnssadhrvrldlglwdkfselatkci
ikivefakrlpgftgltiadqitllkaacldililrictrytpeqdtmtfsdgltlnrtq
mhnagfgpltdlvftfanqllplemddtetgllsaiclicgdrqdleeptkvdklqepll
ealkiyirkrrpskphmfpkilmkitdlrsisakgaervitlkmeipgsmppliqemle

Timeline for d4dm6a1:

• d4dm6a1 first appeared in SCOPe 2.05, called d4dm6a_
  
• d4dm6a1 appears in SCOPe 2.07
  
• d4dm6a1 appears in the current release, SCOPe 2.08