SCOPe 2.06: Domain d3wksa1: 3wks A:21-396

Lineage for d3wksa1 (3wks A:21-396)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.0: automated matches [191328] (1 protein)
   not a true family

6. Protein automated matches [190151] (121 species)
   not a true protein

7. Species Methanocaldococcus jannaschii [TaxId:243232] [258609] (2 PDB entries)

8. Domain d3wksa1: 3wks A:21-396 [265686]
   Other proteins in same PDB: d3wksa2, d3wksb2
   automated match to d3wkrb_
   protein/RNA complex

Details for d3wksa1

PDB Entry: 3wks, 3.03 Å

PDB Description: crystal structure of the sepcyss-sepcyse n-terminal domain complex from

PDB Compounds: (A:) O-phospho-L-seryl-tRNA:Cys-tRNA synthase

SCOPe Domain Sequences for d3wksa1:

Sequence, based on SEQRES records:

>d3wksa1 c.67.1.0 (A:21-396) automated matches {Methanocaldococcus jannaschii [TaxId: 243232]}
dkyknltrsltrefinlnpiqrggilpkeakkavyeywdgysvcdychgrldevtcppik
dflediakflnmdcarpthgaregkfivmhaickegdyvvldknahytsyvaaeraklnv
aevgyeeeyptykinlegykevidnledkgknvglillthvdgeygnlndakkvgkiake
kgipfllncaytvgrmpvngkevkadfivasghksmaasapcgilafseefsdkitktse
kfpvkeiemlgctsrglpivtlmasfphvvervkkwdeelkktryvvdelekigfkqlgi
kpkehdlikfetpvldeiakkdkrrgfffydelkkrgiggiragvtkeikmsvygleweq
veyvvnaikeivesck

Sequence, based on observed residues (ATOM records):

>d3wksa1 c.67.1.0 (A:21-396) automated matches {Methanocaldococcus jannaschii [TaxId: 243232]}
dkyknltrsltrefinlnpiqrggilpkeakkavyeywdgppikdflediakflnmdcar
pthgaregkfivmhaickegdyvvldknahytsyvaaeraklnvaevgyeeeyptykinl
egykevidnledkgknvglillthvdgeygnlndakkvgkiakekgipfllncaytvgrm
pvngkevkadfivasghksmaasapcgilafseefsdkitktsekfpvkeiemlgctsrg
lpivtlmasfphvvervkkwdeelkktryvvdelekigfkqlgikpkehdlikfetpvld
eiakkdkrrgfffydelkkrgiggiragvtkeikmsvygleweqveyvvnaikeivesck

Timeline for d3wksa1:

• d3wksa1 first appeared in SCOPe 2.05, called d3wksa_
  
• d3wksa1 appears in SCOPe 2.07
  
• d3wksa1 appears in the current release, SCOPe 2.08