SCOPe 2.05: Domain d3ugqa1: 3ugq A:33-340

Lineage for d3ugqa1 (3ugq A:33-340)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
   contains large mixed beta-sheet

4. Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families)

5. Family d.104.1.0: automated matches [227172] (1 protein)
   not a true family

6. Protein automated matches [226887] (9 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [267892] (3 PDB entries)

8. Domain d3ugqa1: 3ugq A:33-340 [265514]
   Other proteins in same PDB: d3ugqa2
   automated match to d4hwta1
   complexed with k, so4, zn

Details for d3ugqa1

PDB Entry: 3ugq, 2.1 Å

PDB Description: Crystal structure of the apo form of the yeast mitochondrial threonyl-tRNA synthetase determined at 2.1 Angstrom resolution

PDB Compounds: (A:) Threonyl-tRNA synthetase, mitochondrial

SCOPe Domain Sequences for d3ugqa1:

Sequence, based on SEQRES records:

>d3ugqa1 d.104.1.0 (A:33-340) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
atpatmtsmvsqrqdlfmtdplspgsmfflpngakifnkliefmklqqkfkfgfnevvtp
liykktlweksghwenyaddmfkvettdeekeeyglkpmncpghclifgkkdrsynelpl
rfsdfsplhrneasgalsgltrlrkfhqddghifctpsqvkseifnslklidivynkifp
fvkggsgaesnyfinfstrpdhfigdlkvwnhaeqvlkeileesgkpwklnpgdgafygp
kldimvtdhlrkthqvatiqldfqlperfdlkfkdqdnsykrpimihratfgsierfmal
lidsnegr

Sequence, based on observed residues (ATOM records):

>d3ugqa1 d.104.1.0 (A:33-340) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
atpatmtsmvsqrqdlfmtdplspgsmfflpngakifnkliefmklqqkfkfgfnevvtp
liykktlweksghwenyaddmfkvettdeekeeyglkpmncpghclifgkkdrsynelpl
rfsdfsplhrneasgalsgltrlrkfhqddghifctpsqvkseifnslklidivynkifp
fvgaesnyfinfstrpdhfigdlkvwnhaeqvlkeileesgkpwklnpgdgafygpkldi
mvtdhlrkthqvatiqldfqlperfdlkfkdqdnsykrpimihratfgsierfmallids
negr

Timeline for d3ugqa1:

• d3ugqa1 is new in SCOPe 2.05-stable
  
• d3ugqa1 appears in SCOPe 2.06
  
• d3ugqa1 appears in the current release, SCOPe 2.08