SCOPe 2.05: Domain d3ugma_: 3ugm A:

Lineage for d3ugma_ (3ugm A:)

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.298: Left-handed alpha-alpha superhelix [267589] (1 superfamily)
   multihelical; 2 (curved) layers: alpha/alpha; left-handed superhelix

4. Superfamily a.298.1: TAL effector-like [267596] (1 family)
   Pfam PF03377; repeat; repeats form left-handed bundles that associate in a right-handed superstructure. PubMed 22223736

5. Family a.298.1.1: TAL (transcription activator-like) effector [267609] (5 proteins)
   this is a repeat family; one repeat unit is 4cj9 A:259-292 found in domain

6. Protein PthXo1 [267644] (1 species)

7. Species Xanthomonas oryzae [TaxId:360094] [267703] (1 PDB entry)

8. Domain d3ugma_: 3ugm A: [265513]
   protein/DNA complex

Details for d3ugma_

PDB Entry: 3ugm, 3 Å

PDB Description: Structure of TAL effector PthXo1 bound to its DNA target

PDB Compounds: (A:) TAL effector AvrBs3/PthA

SCOPe Domain Sequences for d3ugma_:

Sequence, based on SEQRES records:

>d3ugma_ a.298.1.1 (A:) PthXo1 {Xanthomonas oryzae [TaxId: 360094]}
kpkvrstvaqhhealvghgfthahivalsqhpaalgtvavtyqhiitalpeathedivgv
gkqwsgaralealltdagelrgpplqldtgqlvkiakrggvtameavhasrnaltgapln
ltpaqvvaiasnnggkqaletvqrllpvlcqahgltpaqvvaiashdggkqaletmqrll
pvlcqahglppdqvvaiasniggkqaletvqrllpvlcqahgltpdqvvaiashgggkqa
letvqrllpvlcqahgltpdqvvaiashdggkqaletvqrllpvlcqahgltpdqvvaia
sngggkqaletvqrllpvlcqahgltpdqvvaiasnggkqaletvqrllpvlcqahgltp
dqvvaiashdggkqaletvqrllpvlcqthgltpaqvvaiashdggkqaletvqqllpvl
cqahgltpdqvvaiasniggkqalatvqrllpvlcqahgltpdqvvaiasngggkqalet
vqrllpvlcqahgltpdqvvaiasngggkqaletvqrllpvlcqahgltqvqvvaiasni
ggkqaletvqrllpvlcqahgltpaqvvaiashdggkqaletvqrllpvlcqahgltpdq
vvaiasngggkqaletvqrllpvlcqahgltqeqvvaiasnnggkqaletvqrllpvlcq
ahgltpdqvvaiasngggkqaletvqrllpvlcqahgltpaqvvaiasniggkqaletvq
rllpvlcqdhgltlaqvvaiasniggkqaletvqrllpvlcqahgltqdqvvaiasnigg
kqaletvqrllpvlcqdhgltpdqvvaiasniggkqaletvqrllpvlcqdhgltldqvv
aiasnggkqaletvqrllpvlcqdhgltpdqvvaiasnsg

Sequence, based on observed residues (ATOM records):

>d3ugma_ a.298.1.1 (A:) PthXo1 {Xanthomonas oryzae [TaxId: 360094]}
kpkvrelvahivalsqhpaalgtvavtyqhiitalathedivgvgkqwsgaralealltd
agelrgpplqldtgqlvkiakrggvtameavhasrnaltplnltpaqvvaiasnnggkqa
letvqrllpvlcqahgltpaqvvaiashdggkqaletmqrllpvlcqahglppdqvvaia
sniggkqaletvqrllpvlcqahgltpdqvvaiashgggkqaletvqrllpvlcqahglt
pdqvvaiashdggkqaletvqrllpvlcqahgltpdqvvaiasngggkqaletvqrllpv
lcqahgltpdqvvaiasnggkqaletvqrllpvlcqahgltpdqvvaiashdggkqalet
vqrllpvlcqthgltpaqvvaiashdggkqaletvqqllpvlcqahgltpdqvvaiasni
ggkqalatvqrllpvlcqahgltpdqvvaiasngggkqaletvqrllpvlcqahgltpdq
vvaiasngggkqaletvqrllpvlcqahgltqvqvvaiasniggkqaletvqrllpvlcq
ahgltpaqvvaiashdggkqaletvqrllpvlcqahgltpdqvvaiasngggkqaletvq
rllpgltqeqvvaiasnnggkqaletvqrllpvlcqahgltpdqvvaiasngggkqalet
vqrllpvlcqahgltpaqvvaiasniggkqaletvqrllpvlcqdhgltlaqvvaiasni
ggkqaletvqrllpvlcqgltqdqvvaiasniggkqaletvqrllpvlcqdhgltpdqvv
aiasniggkqaletvqrllpvlcqdhgltldqvvaiasnggkqaletvqrllpvlcqdhg
ltpdqvvaiasnsg

Timeline for d3ugma_:

• d3ugma_ is new in SCOPe 2.05-stable
  
• d3ugma_ appears in SCOPe 2.06
  
• d3ugma_ appears in the current release, SCOPe 2.08