Lineage for d3ekma1 (3ekm A:25-158)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2164557Fold d.21: Diaminopimelate epimerase-like [54505] (1 superfamily)
    mixed beta-sheet folds into a barrel (n=8, S=14) around the central helix
  4. 2164558Superfamily d.21.1: Diaminopimelate epimerase-like [54506] (5 families) (S)
    duplication: consists of two similar domain swapped with C-terminal strands
  5. 2164559Family d.21.1.1: Diaminopimelate epimerase [54507] (1 protein)
    automatically mapped to Pfam PF01678
  6. 2164560Protein Diaminopimelate epimerase [54508] (3 species)
  7. 2164583Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [267831] (2 PDB entries)
  8. 2164596Domain d3ekma1: 3ekm A:25-158 [264757]
    automated match to d4ijza1
    complexed with zdr

Details for d3ekma1

PDB Entry: 3ekm (more details), 2.3 Å

PDB Description: Crystal structure of diaminopimelate epimerase form arabidopsis thaliana in complex with irreversible inhibitor DL-AziDAP
PDB Compounds: (A:) Diaminopimelate epimerase, chloroplastic

SCOPe Domain Sequences for d3ekma1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3ekma1 d.21.1.1 (A:25-158) Diaminopimelate epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

SCOPe Domain Coordinates for d3ekma1:

Click to download the PDB-style file with coordinates for d3ekma1.
(The format of our PDB-style files is described here.)

Timeline for d3ekma1: