Lineage for d4w9kj_ (4w9k J:)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2158219Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2158220Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2158221Family d.15.1.1: Ubiquitin-related [54237] (39 protein domains)
    Pfam PF00240
  6. 2158246Protein Elongin B [54246] (2 species)
  7. 2158247Species Human (Homo sapiens) [TaxId:9606] [54247] (28 PDB entries)
  8. 2158271Domain d4w9kj_: 4w9k J: [264083]
    Other proteins in same PDB: d4w9kb_, d4w9kc_, d4w9ke_, d4w9kf_, d4w9kh_, d4w9ki_, d4w9kk1, d4w9kk2, d4w9kl_
    automated match to d1lqba_
    complexed with 3jo

Details for d4w9kj_

PDB Entry: 4w9k (more details), 2.1 Å

PDB Description: pVHL:EloB:EloC in complex with (2S,4R)-1-((S)-2-((S)-2-acetamido-3-phenylpropanamido)-3,3-dimethylbutanoyl)-4-hydroxy-N-(4-(4-methylthiazol-5-yl)benzyl)pyrrolidine-2-carboxamide (ligand 14)
PDB Compounds: (J:) Transcription elongation factor B polypeptide 2

SCOPe Domain Sequences for d4w9kj_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4w9kj_ d.15.1.1 (J:) Elongin B {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d4w9kj_:

Click to download the PDB-style file with coordinates for d4w9kj_.
(The format of our PDB-style files is described here.)

Timeline for d4w9kj_: