Lineage for d4julj1 (4jul J:11-323)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2040266Fold b.19: Viral protein domain [49817] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
  4. 2040267Superfamily b.19.1: Viral protein domain [49818] (4 families) (S)
    forms homotrimers
  5. 2040314Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 protein domains)
  6. 2040315Protein Hemagglutinin [49824] (9 species)
    includes rudiment esterase domain
  7. 2040355Species Influenza A virus, different strains [TaxId:11320] [49825] (116 PDB entries)
  8. 2040618Domain d4julj1: 4jul J:11-323 [262775]
    Other proteins in same PDB: d4jula2, d4julb_, d4julc2, d4juld_, d4jule2, d4julf_, d4julh2, d4juli_, d4julj2, d4julk_, d4julm_
    automated match to d3gbna_
    complexed with nag

Details for d4julj1

PDB Entry: 4jul (more details), 2.79 Å

PDB Description: Crystal structure of H5N1 influenza virus hemagglutinin, clade 2.3.4
PDB Compounds: (J:) hemagglutinin HA1

SCOPe Domain Sequences for d4julj1:

Sequence; same for both SEQRES and ATOM records: (download)

>d4julj1 b.19.1.2 (J:11-323) Hemagglutinin {Influenza A virus, different strains [TaxId: 11320]}
dqicigyhannsteqvdtimeknvtvthaqdilekthngklcdldgvkplilrdcsvagw
llgnpmcdefinvpewsyivekanpandlcypgnfndyeelkhllsrinhfekiqiipks
swsdheassgvssacpyqgtpsffrnvvwlikknntyptikrsynntnqedllilwgihh
sndaaeqtklyqnpttyisvgtstlnqrlvpkiatrskvngqsgrmdffwtilkpndain
fesngnfiapeyaykivkkgdsaiikseveygncntkcqtpigainssmpfhnihpltig
ecpkyvksnklvlatglrns

SCOPe Domain Coordinates for d4julj1:

Click to download the PDB-style file with coordinates for d4julj1.
(The format of our PDB-style files is described here.)

Timeline for d4julj1:

  • d4julj1 first appeared in SCOPe 2.05, called d4julj_