SCOPe 2.08: Domain d4jgyb_: 4jgy B:

Lineage for d4jgyb_ (4jgy B:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

5. Family b.121.4.0: automated matches [191569] (1 protein)
   not a true family

6. Protein automated matches [190988] (51 species)
   not a true protein

7. Species Human coxsackievirus a16 [TaxId:31704] [256333] (2 PDB entries)

8. Domain d4jgyb_: 4jgy B: [262755]
   automated match to d4rqpc_

Details for d4jgyb_

PDB Entry: 4jgy, 3 Å

PDB Description: Crystal structure of human coxsackievirus A16 uncoating intermediate (space group P4232)

PDB Compounds: (B:) Polyprotein, capsid protein VP2

SCOPe Domain Sequences for d4jgyb_:

Sequence, based on SEQRES records:

>d4jgyb_ b.121.4.0 (B:) automated matches {Human coxsackievirus a16 [TaxId: 31704]}
acgysdrvaqltignstittqeaaniviaygewpeycpdtdatavdkptrpdvsvnrfft
ldtkswakdskgwywkfpdvltevgvfgqnaqfhylyrsgfcvhvqcnaskfhqgallva
vlpeyvlgtiaggtgnenshppyattqpgqvgavlthpyvldagiplsqltvcphqwinl
rtnncatiivpymntvpfdsalnhcnfgllvipvvpldfntgatseipitvtiapmcaef
aglr

Sequence, based on observed residues (ATOM records):

>d4jgyb_ b.121.4.0 (B:) automated matches {Human coxsackievirus a16 [TaxId: 31704]}
acgysdrvaqltignstittqeaaniviaygewpeycpdtdatavdkptrpdvsvnrfft
ldtkswakdskgwywkfpdvltevgvfgqnaqfhylyrsgfcvhvqcnaskfhqgallva
vlpeyvlgtiaenshppyattqpgqvgavlthpyvldagiplsqltvcphqwinlrtnnc
atiivpymntvpfdsalnhcnfgllvipvvpldfntgatseipitvtiapmcaefaglr

Timeline for d4jgyb_:

• d4jgyb_ first appeared in SCOPe 2.05
  
• d4jgyb_ appears in SCOPe 2.07