SCOPe 2.06: Domain d4bl5c1: 4bl5 C:8-321

Lineage for d4bl5c1 (4bl5 C:8-321)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (239 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [186944] (46 PDB entries)

8. Domain d4bl5c1: 4bl5 C:8-321 [262519]
   Other proteins in same PDB: d4bl5a2, d4bl5b2, d4bl5c2, d4bl5d2, d4bl5e2, d4bl5g2, d4bl5h2, d4bl5i2, d4bl5l2
   automated match to d4bkpc_
   complexed with edo, gfb, nap

Details for d4bl5c1

PDB Entry: 4bl5, 2.6 Å

PDB Description: crystal structure of human gdp-l-fucose synthase with bound nadp and product gdp-l-fucose

PDB Compounds: (C:) GDP-l-fucose synthase

SCOPe Domain Sequences for d4bl5c1:

Sequence; same for both SEQRES and ATOM records:

>d4bl5c1 c.2.1.0 (C:8-321) automated matches {Human (Homo sapiens) [TaxId: 9606]}
mrilvtggsglvgkaiqkvvadgaglpgedwvfvsskdadltdtaqtralfekvqpthvi
hlaamvgglfrnikynldfwrknvhmndnvlhsafevgarkvvsclstcifpdkttypid
etmihngpphnsnfgysyakrmidvqnrayfqqygctftaviptnvfgphdnfniedghv
lpglihkvhlakssgsaltvwgtgnprrqfiysldlaqlfiwvlreynevepiilsvgee
devsikeaaeavveamdfhgevtfdttksdgqfkktasnsklrtylpdfrftpfkqavke
tcawftdnyeqark

Timeline for d4bl5c1:

• d4bl5c1 first appeared in SCOPe 2.05, called d4bl5c_
  
• d4bl5c1 appears in SCOPe 2.07
  
• d4bl5c1 appears in the current release, SCOPe 2.08