SCOPe 2.08: Domain d3whkb1: 3whk B:169-425

Lineage for d3whkb1 (3whk B:169-425)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.0: automated matches [191323] (1 protein)
   not a true family

6. Protein automated matches [190123] (158 species)
   not a true protein

7. Species Pyrococcus furiosus [TaxId:186497] [238073] (2 PDB entries)

8. Domain d3whkb1: 3whk B:169-425 [262407]
   Other proteins in same PDB: d3whka2, d3whkb2, d3whkc2, d3whkd2, d3whke2, d3whkf2, d3whkg2, d3whkh2
   automated match to d3whke_
   complexed with atp

Details for d3whkb1

PDB Entry: 3whk, 2.6 Å

PDB Description: crystal structure of pan-rpt5c chimera

PDB Compounds: (B:) Proteasome-activating nucleotidase, 26S protease regulatory subunit 6A

SCOPe Domain Sequences for d3whkb1:

Sequence, based on SEQRES records:

>d3whkb1 c.37.1.0 (B:169-425) automated matches {Pyrococcus furiosus [TaxId: 186497]}
gfevverpnvtyndigglkkqlqelreaielplkhpelfeevgidppkgvllygppgcgk
tlmakaiahevnatfirvvgselvrkyigegarlvhelfelakekaptiifideidaiga
krldettggerevnrtlmqllaemdgfdprgnvkviaatnrpdildpallrpgrfdrlie
vplpdefsraqilqihsrkmttdddinwqelarstdefngaqlkavtveagmialrngqs
svkhedfvegisevqar

Sequence, based on observed residues (ATOM records):

>d3whkb1 c.37.1.0 (B:169-425) automated matches {Pyrococcus furiosus [TaxId: 186497]}
gfevverpnvtyndigglkkqlqelreaielplkhpelfeevgidppkgvllygppgcgk
tlmakaiahevnatfirvvgselvregarlvhelfelakekaptiifideidaigakevn
rtlmqllaemdgfdprgnvkviaatnrpdildpallrpgrfdrlievplpdefsraqilq
ihsrkmttdddinwqelarstdefngaqlkavtveagmialrngqssvkhedfvegisev
qar

Timeline for d3whkb1:

• d3whkb1 first appeared in SCOPe 2.05, called d3whkb_
  
• d3whkb1 appears in SCOPe 2.07