Lineage for d1ycp.2 (1ycp J:,K:,M:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2387558Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. 2387559Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) (S)
  5. 2387819Family b.47.1.2: Eukaryotic proteases [50514] (49 protein domains)
  6. 2388608Protein Thrombin [50531] (2 species)
  7. Species Cow (Bos taurus) [TaxId:9913] [50533] (19 PDB entries)
    Uniprot P00734 333-622
  8. 2388626Domain d1ycp.2: 1ycp J:,K:,M: [26215]

Details for d1ycp.2

PDB Entry: 1ycp (more details), 2.5 Å

PDB Description: the crystal structure of fibrinogen-aa peptide 1-23 (f8y) bound to bovine thrombin explains why the mutation of phe-8 to tyrosine strongly inhibits normal cleavage at arginine-16
PDB Compounds: (J:) epsilon thrombin, (K:) epsilon thrombin, (M:) epsilon thrombin

SCOPe Domain Sequences for d1ycp.2:

Sequence; same for both SEQRES and ATOM records: (download)

>g1ycp.2 b.47.1.2 (J:,K:,M:) Thrombin {Cow (Bos taurus) [TaxId: 9913]}

SCOPe Domain Coordinates for d1ycp.2:

Click to download the PDB-style file with coordinates for d1ycp.2.
(The format of our PDB-style files is described here.)

Timeline for d1ycp.2: