SCOPe 2.05: Domain d4nd5b1: 4nd5 B:17-164

Lineage for d4nd5b1 (4nd5 B:17-164)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.5: LDH N-terminal domain-like [51848] (9 proteins)

6. Protein Lactate dehydrogenase [51859] (17 species)

7. Species Cryptosporidium parvum [TaxId:5807] [225185] (6 PDB entries)

8. Domain d4nd5b1: 4nd5 B:17-164 [261796]
   Other proteins in same PDB: d4nd5a2, d4nd5b2, d4nd5c2, d4nd5d2
   automated match to d2ewda1

Details for d4nd5b1

PDB Entry: 4nd5, 2.1 Å

PDB Description: crystal structure of the lactate dehydrogenase from cryptosporidium parvum

PDB Compounds: (B:) Lactate dehydrogenase, adjacent gene encodes predicted malate dehydrogenase

SCOPe Domain Sequences for d4nd5b1:

Sequence, based on SEQRES records:

>d4nd5b1 c.2.1.5 (B:17-164) Lactate dehydrogenase {Cryptosporidium parvum [TaxId: 5807]}
mierrkiavigsgqiggniayivgkdnladvvlfdiaegipqgkaldithsmvmfgstsk
vigtndyadisgsdvviitasipgrpkddrsellfgnarildsvaegvkkycpnafvici
tnpldvmvshfqkvsglphnkvcgma

Sequence, based on observed residues (ATOM records):

>d4nd5b1 c.2.1.5 (B:17-164) Lactate dehydrogenase {Cryptosporidium parvum [TaxId: 5807]}
mierrkiavigsgqiggniayivgkdnladvvlfdiaegipqgkaldithsmvmfgstsk
vigtndyadisgsdvviitallfgnarildsvaegvkkycpnafvicitnpldvmvshfq
kvsglphnkvcgma

Timeline for d4nd5b1:

• d4nd5b1 first appeared in SCOPe 2.04
  
• d4nd5b1 appears in SCOPe 2.06
  
• d4nd5b1 appears in the current release, SCOPe 2.08