SCOPe 2.08: Domain d4rqql2: 4rqq L:107-212

Lineage for d4rqql2 (4rqq L:107-212)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)

6. Protein automated matches [190374] (15 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187221] (1251 PDB entries)

8. Domain d4rqql2: 4rqq L:107-212 [261580]
   Other proteins in same PDB: d4rqqa1, d4rqqb_, d4rqqc1, d4rqqd_, d4rqqh_, d4rqql1
   automated match to d1dn0a2

Details for d4rqql2

PDB Entry: 4rqq, 3.1 Å

PDB Description: Crystal structure of human Fab PGDM1400, a broadly reactive and potent HIV-1 neutralizing antibody

PDB Compounds: (L:) Human anti-HIV-1 antibody PGDM1400 light chain

SCOPe Domain Sequences for d4rqql2:

Sequence; same for both SEQRES and ATOM records:

>d4rqql2 b.1.1.2 (L:107-212) automated matches {Human (Homo sapiens) [TaxId: 9606]}
krtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteq
dskdstyslsstltlskadyekhkvyacevthqglsspvtksfnrg

Timeline for d4rqql2:

• d4rqql2 first appeared in SCOPe 2.04
  
• d4rqql2 appears in SCOPe 2.07