SCOPe 2.05: Domain d4rkfa_: 4rkf A:

Lineage for d4rkfa_ (4rkf A:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.0: automated matches [191323] (1 protein)
   not a true family

6. Protein automated matches [190123] (96 species)
   not a true protein

7. Species Fruit fly (Drosophila melanogaster) [TaxId:7227] [225598] (7 PDB entries)

8. Domain d4rkfa_: 4rkf A: [261577]
   automated match to d3l0ib_
   complexed with 1pe, gnp, mg

Details for d4rkfa_

PDB Entry: 4rkf, 1.5 Å

PDB Description: Drosophila melanogaster Rab3 bound to GMPPNP

PDB Compounds: (A:) Ras-related protein Rab-3

SCOPe Domain Sequences for d4rkfa_:

Sequence; same for both SEQRES and ATOM records:

>d4rkfa_ c.37.1.0 (A:) automated matches {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
qnfdymfklliignssvgktsflfryaddsftsafvstvgidfkvktvfrhdkrvklqiw
dtagleryrtittayyrgamgfilmydvtnedsfnsvqdwvtqiktyswdnaqvilvgnk
cdmedqrvisfergrqladqlgveffetsakenvnvkavferlvdiicdkm

Timeline for d4rkfa_:

• d4rkfa_ first appeared in SCOPe 2.04
  
• d4rkfa_ appears in SCOPe 2.06
  
• d4rkfa_ appears in the current release, SCOPe 2.08