Lineage for d4ub8v_ (4ub8 V:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1980368Fold a.3: Cytochrome c [46625] (1 superfamily)
    core: 3 helices; folded leaf, opened
  4. 1980369Superfamily a.3.1: Cytochrome c [46626] (9 families) (S)
    covalently-bound heme completes the core
  5. 1980370Family a.3.1.1: monodomain cytochrome c [46627] (16 protein domains)
  6. 1980425Protein Cytochrome c550 [100991] (2 species)
  7. 1980428Species Thermosynechococcus vulcanus [TaxId:32053] [259629] (5 PDB entries)
  8. 1980431Domain d4ub8v_: 4ub8 V: [261440]
    Other proteins in same PDB: d4ub8a_, d4ub8b_, d4ub8c_, d4ub8d_, d4ub8e_, d4ub8f_, d4ub8h_, d4ub8i_, d4ub8j_, d4ub8k_, d4ub8l_, d4ub8m_, d4ub8o_, d4ub8u_, d4ub8x_, d4ub8z_
    automated match to d1mz4a_
    complexed with bcr, bct, ca, cl, cla, dgd, fe2, gol, hem, htg, lhg, lmg, lmt, mg, oex, pho, pl9, sqd, unl

Details for d4ub8v_

PDB Entry: 4ub8 (more details), 1.95 Å

PDB Description: native structure of photosystem ii (dataset-2) by a femtosecond x-ray laser
PDB Compounds: (V:) cytochrome c-550

SCOPe Domain Sequences for d4ub8v_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4ub8v_ a.3.1.1 (V:) Cytochrome c550 {Thermosynechococcus vulcanus [TaxId: 32053]}

SCOPe Domain Coordinates for d4ub8v_:

Click to download the PDB-style file with coordinates for d4ub8v_.
(The format of our PDB-style files is described here.)

Timeline for d4ub8v_: