Lineage for d1abi.1 (1abi L:,H:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2794584Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. 2794585Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) (S)
  5. 2794859Family b.47.1.2: Eukaryotic proteases [50514] (49 proteins)
  6. 2795761Protein Thrombin [50531] (2 species)
  7. 2795797Species Human (Homo sapiens) [TaxId:9606] [50532] (171 PDB entries)
    Uniprot P00734 331-361,364-421 ! Uniprot P00734 334-360 364-510 518-619 ! Uniprot P00734 328-620 ! Uniprot P00734 355-621 ! Uniprot P00734 328-620
  8. 2795863Domain d1abi.1: 1abi L:,H: [26137]

Details for d1abi.1

PDB Entry: 1abi (more details), 2.3 Å

PDB Description: structure of the hirulog 3-thrombin complex and nature of the s' subsites of substrates and inhibitors
PDB Compounds: (H:) alpha-thrombin (large subunit), (L:) alpha-thrombin (small subunit)

SCOPe Domain Sequences for d1abi.1:

Sequence, based on SEQRES records: (download)

>g1abi.1 b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens) [TaxId: 9606]}
sgeadcglrplfekksledkterellesyidgrXivegsdaeigmspwqvmlfrkspqel
lcgaslisdrwvltaahcllyppwdknftendllvrigkhsrtryerniekismlekiyi
hprynwrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlke
twtanvgkgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsg
gpfvmkspfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqfge

Sequence, based on observed residues (ATOM records): (download)

>g1abi.1 b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens) [TaxId: 9606]}
sgeadcglrplfekksledkterellesyidgrXivegsdaeigmspwqvmlfrkspqel
lcgaslisdrwvltaahcllyppwdknftendllvrigkhsrtryerniekismlekiyi
hprynwrenldrdialmklkkpvafsdyihpvclpdretaasllqagykgrvtgwgnlke
tgqpsvlqvvnlpiverpvckdstriritdnmfcagykpdegkrgdacegdsggpfvmks
pfnnrwyqmgivswgegcdrdgkygfythvfrlkkwiqkvidqfge

SCOPe Domain Coordinates for d1abi.1:

Click to download the PDB-style file with coordinates for d1abi.1.
(The format of our PDB-style files is described here.)

Timeline for d1abi.1: