SCOPe 2.08: Domain d4wk5a1: 4wk5 A:1-268

Lineage for d4wk5a1 (4wk5 A:1-268)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.0: automated matches [196408] (1 protein)
   not a true family

6. Protein automated matches [196409] (46 species)
   not a true protein

7. Species Thermotoga neapolitana [TaxId:309803] [261178] (1 PDB entry)

8. Domain d4wk5a1: 4wk5 A:1-268 [261179]
   Other proteins in same PDB: d4wk5a2
   automated match to d3ts7a_

Details for d4wk5a1

PDB Entry: 4wk5, 1.7 Å

PDB Description: crystal structure of a isoprenoid synthase family member from thermotoga neapolitana dsm 4359, target efi-509458

PDB Compounds: (A:) Geranyltranstransferase

SCOPe Domain Sequences for d4wk5a1:

Sequence, based on SEQRES records:

>d4wk5a1 a.128.1.0 (A:1-268) automated matches {Thermotoga neapolitana [TaxId: 309803]}
mkketierrieelvkphfnlltesamqysvtaggkrirpllvltvgedigveeerlvdva
vavelfhtaslvhddlppidnadfrrgkpschraygegiallagdglfflafsqiakvre
pklfeefsetayklllgeamdveferqekeisvemvekmysfktgalfafcfsapfllkg
ldhtfvkklgekfgvafqiyddlkdvlgsleklgkdvgkdvkkvtlvkkmgvqkakqlad
kyyeevlealeseglhrtfdflrnlkkm

Sequence, based on observed residues (ATOM records):

>d4wk5a1 a.128.1.0 (A:1-268) automated matches {Thermotoga neapolitana [TaxId: 309803]}
mkketierrieelvkphfnlltesamqysvtaggkrirpllvltvgedigveeerlvdva
vavelfhtaslvhddlppidnadfrrgkpschraygegiallagdglfflafsqiakvre
pklfeefsetayklllgeamdveferqekeisvemvekmysfktgalfafcfsapfllkg
ldhtfvkklgekfgvafqiyddlkdvlgskvtlvkkmgvqkakqladkyyeevlealese
glhrtfdflrnlkkm

Timeline for d4wk5a1:

• d4wk5a1 first appeared in SCOPe 2.04, called d4wk5a_
  
• d4wk5a1 appears in SCOPe 2.07