SCOPe 2.04: Domain d4kyod_: 4kyo D:

Lineage for d4kyod_ (4kyo D:)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (24 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

4. Superfamily a.118.8: TPR-like [48452] (9 families)

5. Family a.118.8.1: Tetratricopeptide repeat (TPR) [48453] (18 proteins)
   this is a repeat family; one repeat unit is 1zb1 A:166-231 found in domain

6. Protein automated matches [190103] (4 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [186825] (10 PDB entries)

8. Domain d4kyod_: 4kyo D: [261086]
   Other proteins in same PDB: d4kyoa_, d4kyoc_
   automated match to d2j9qa_
   complexed with bme, btb, so4

Details for d4kyod_

PDB Entry: 4kyo, 2.2 Å

PDB Description: Alanine-glyoxylate aminotransferase variant K390A in complex with the TPR domain of human Pex5p

PDB Compounds: (D:) peroxisomal targeting signal 1 receptor

SCOPe Domain Sequences for d4kyod_:

Sequence, based on SEQRES records:

>d4kyod_ a.118.8.1 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qfeeenplrdhpqpfeeglrrlqegdlpnavllfeaavqqdpkhmeawqylgttqaeneq
ellaisalrrclelkpdnqtalmalavsftneslqrqacetlrdwlrytpayahlvtpae
egaggaglgpskrilgsllsdslflevkelflaavrldptsidpdvqcglgvlfnlsgey
dkavdcftaalsvrpndyllwnklgatlangnqseeavaayrralelqpgyirsrynlgi
scinlgahreavehflealnmqrksrgprgeggamseniwstlrlalsmlgqsdaygaad
ardlstlltmfglpq

Sequence, based on observed residues (ATOM records):

>d4kyod_ a.118.8.1 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qfeeenplrdhpqpfeeglrrlqegdlpnavllfeaavqqdpkhmeawqylgttqaeneq
ellaisalrrclelkpdnqtalmalavsftneslqrqacetlrdwlrytpayahlvdslf
levkelflaavrldptsidpdvqcglgvlfnlsgeydkavdcftaalsvrpndyllwnkl
gatlangnqseeavaayrralelqpgyirsrynlgiscinlgahreavehflealnmqrk
sggamseniwstlrlalsmlgqsdaygaadardlstlltmfglpq

Timeline for d4kyod_:

• d4kyod_ is new in SCOPe 2.04-stable
  
• d4kyod_ appears in SCOPe 2.05
  
• d4kyod_ appears in the current release, SCOPe 2.08