Lineage for d4kyod_ (4kyo D:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2006336Fold a.118: alpha-alpha superhelix [48370] (25 superfamilies)
    multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix
  4. 2007336Superfamily a.118.8: TPR-like [48452] (9 families) (S)
  5. 2007337Family a.118.8.1: Tetratricopeptide repeat (TPR) [48453] (20 protein domains)
  6. 2007457Protein automated matches [190103] (4 species)
    not a true protein
  7. 2007462Species Human (Homo sapiens) [TaxId:9606] [186825] (11 PDB entries)
  8. 2007473Domain d4kyod_: 4kyo D: [261086]
    Other proteins in same PDB: d4kyoa_, d4kyoc_
    automated match to d2j9qa_
    complexed with bme, btb, so4

Details for d4kyod_

PDB Entry: 4kyo (more details), 2.2 Å

PDB Description: Alanine-glyoxylate aminotransferase variant K390A in complex with the TPR domain of human Pex5p
PDB Compounds: (D:) peroxisomal targeting signal 1 receptor

SCOPe Domain Sequences for d4kyod_:

Sequence, based on SEQRES records: (download)

>d4kyod_ a.118.8.1 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qfeeenplrdhpqpfeeglrrlqegdlpnavllfeaavqqdpkhmeawqylgttqaeneq
ellaisalrrclelkpdnqtalmalavsftneslqrqacetlrdwlrytpayahlvtpae
egaggaglgpskrilgsllsdslflevkelflaavrldptsidpdvqcglgvlfnlsgey
dkavdcftaalsvrpndyllwnklgatlangnqseeavaayrralelqpgyirsrynlgi
scinlgahreavehflealnmqrksrgprgeggamseniwstlrlalsmlgqsdaygaad
ardlstlltmfglpq

Sequence, based on observed residues (ATOM records): (download)

>d4kyod_ a.118.8.1 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qfeeenplrdhpqpfeeglrrlqegdlpnavllfeaavqqdpkhmeawqylgttqaeneq
ellaisalrrclelkpdnqtalmalavsftneslqrqacetlrdwlrytpayahlvdslf
levkelflaavrldptsidpdvqcglgvlfnlsgeydkavdcftaalsvrpndyllwnkl
gatlangnqseeavaayrralelqpgyirsrynlgiscinlgahreavehflealnmqrk
sggamseniwstlrlalsmlgqsdaygaadardlstlltmfglpq

SCOPe Domain Coordinates for d4kyod_:

Click to download the PDB-style file with coordinates for d4kyod_.
(The format of our PDB-style files is described here.)

Timeline for d4kyod_: