SCOPe 2.06: Domain d4junc1: 4jun C:11-323

Lineage for d4junc1 (4jun C:11-323)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.19: Viral protein domain [49817] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll; form trimers

4. Superfamily b.19.1: Viral protein domain [49818] (4 families)
   forms homotrimers

5. Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 proteins)

6. Protein Hemagglutinin [49824] (9 species)
   includes rudiment esterase domain

7. Species Influenza A virus, different strains [TaxId:11320] [49825] (116 PDB entries)

8. Domain d4junc1: 4jun C:11-323 [261077]
   Other proteins in same PDB: d4juna2, d4junb_, d4junc2, d4jund_, d4june2, d4junf_
   automated match to d4bh4a_
   complexed with epe, nag

Details for d4junc1

PDB Entry: 4jun, 2.34 Å

PDB Description: crystal structure of h5n1 influenza virus hemagglutinin, clade 5

PDB Compounds: (C:) hemagglutinin HA1

SCOPe Domain Sequences for d4junc1:

Sequence; same for both SEQRES and ATOM records:

>d4junc1 b.19.1.2 (C:11-323) Hemagglutinin {Influenza A virus, different strains [TaxId: 11320]}
dqicigyhannsteqvdtimeknvtvthaqdilekthngklcdldgvkplilrdcsvagw
llgnpicdefinvpewsyivekaspandlcypgdfndyeelkhllsrinhfekiqiipks
swsnheassgvssacpyqgrpsffrnvvwlikknsayptikrsynntsqedllvlwgihh
pndaaeqtklyqnpttyisvgtstlnqrlvpriatrskvngqsgrmeffwtilkpndain
fesngnfiapeyaykivkkgdsaimkseleygncntkcqtpmgainssmpfhnihpltig
ecpkyvkssrlvlatglrns

Timeline for d4junc1:

• d4junc1 first appeared in SCOPe 2.04, called d4junc_
  
• d4junc1 was called d4junc_ in SCOPe 2.05
  
• d4junc1 appears in SCOPe 2.07
  
• d4junc1 appears in the current release, SCOPe 2.08