SCOPe 2.06: Domain d4um9c1: 4um9 C:1-438

Lineage for d4um9c1 (4um9 C:1-438)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.69: 7-bladed beta-propeller [50964] (15 superfamilies)
   consists of seven 4-stranded beta-sheet motifs; meander

4. Superfamily b.69.8: Integrin alpha N-terminal domain [69318] (2 families)

5. Family b.69.8.1: Integrin alpha N-terminal domain [69319] (2 proteins)

6. Protein automated matches [254690] (1 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [255892] (11 PDB entries)

8. Domain d4um9c1: 4um9 C:1-438 [260986]
   Other proteins in same PDB: d4um9a2, d4um9c2
   automated match to d1m1xa4
   complexed with ca, man, mg, nag, so4

Details for d4um9c1

PDB Entry: 4um9, 2.5 Å

PDB Description: crystal structure of alpha v beta 6 with peptide

PDB Compounds: (C:) Integrin alpha-V

SCOPe Domain Sequences for d4um9c1:

Sequence, based on SEQRES records:

>d4um9c1 b.69.8.1 (C:1-438) automated matches {Human (Homo sapiens) [TaxId: 9606]}
fnldvdspaeysgpegsyfgfavdffvpsassrmfllvgapkanttqpgiveggqvlkcd
wsstrrcqpiefdatgnrdyakddplefkshqwfgasvrskqdkilacaplyhwrtemkq
erepvgtcflqdgtktveyapcrsqdidadgqgfcqggfsidftkadrvllggpgsfywq
gqlisdqvaeivskydpnvysikynnqlatrtaqaifddsylgysvavgdfngdgiddfv
sgvpraartlgmvyiydgknmsslynftgeqmaayfgfsvaatdingddyadvfigaplf
mdrgsdgklqevgqvsvslqrasgdfqttklngfevfarfgsaiaplgdldqdgfndiai
aapyggedkkgivyifngrstglnavpsqilegqwaarscppsfgysmkgatdidkngyp
dlivgafgvdrailyrar

Sequence, based on observed residues (ATOM records):

>d4um9c1 b.69.8.1 (C:1-438) automated matches {Human (Homo sapiens) [TaxId: 9606]}
fnldvdspaeysgpegsyfgfavdffvpsrmfllvgapkanttqpgiveggqvlkcdwss
trrcqpiefdatgnrdyakddplefkshqwfgasvrskqdkilacaplyhwrtemkqere
pvgtcflqdgtktveyapcrsqdidadgqgfcqggfsidftkadrvllggpgsfywqgql
isdqvaeivskydpnvysikynnqlatrtaqaifddsylgysvavgdfngdgiddfvsgv
praartlgmvyiydgknmsslynftgeqmaayfgfsvaatdingddyadvfigaplfmdr
gsdgklqevgqvsvslqrasgdfqttklngfevfarfgsaiaplgdldqdgfndiaiaap
yggedkkgivyifngrstglnavpsqilegqwaarscppsfgysmkgatdidkngypdli
vgafgvdrailyrar

Timeline for d4um9c1:

• d4um9c1 first appeared in SCOPe 2.04
  
• d4um9c1 appears in SCOPe 2.05
  
• d4um9c1 appears in SCOPe 2.07
  
• d4um9c1 appears in the current release, SCOPe 2.08