Lineage for Species: Human immunodeficiency virus type 1 group m subtype b [TaxId: 11698]

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2316392Fold a.28: Acyl carrier protein-like [47335] (3 superfamilies)
    4 helices, bundle; helix 3 is shorter than others; up-and-down
  4. 2316654Superfamily a.28.3: Retrovirus capsid dimerization domain-like [47353] (3 families) (S)
  5. 2316731Family a.28.3.0: automated matches [191629] (1 protein)
    not a true family
  6. 2316732Protein automated matches [191156] (10 species)
    not a true protein
  7. 2316789Species Human immunodeficiency virus type 1 group m subtype b [TaxId:11698] [260980] (5 PDB entries)

PDB entries in Species: Human immunodeficiency virus type 1 group m subtype b [TaxId: 11698]:

  1. Domain(s) for 4u0e:
  2. Domain(s) for 4u0f:
  3. Domain(s) for 4wym:
    1. 2316792Domain d4wyma2: 4wym A:148-220 [262159]
      Other proteins in same PDB: d4wyma1, d4wymb1, d4wymc1, d4wymd1, d4wyme1, d4wymf1, d4wymg1, d4wymh1, d4wymi1, d4wymj1, d4wymk1, d4wyml1
      automated match to d2m8pa2
    2. 2316793Domain d4wymb2: 4wym B:148-220 [262171]
      Other proteins in same PDB: d4wyma1, d4wymb1, d4wymc1, d4wymd1, d4wyme1, d4wymf1, d4wymg1, d4wymh1, d4wymi1, d4wymj1, d4wymk1, d4wyml1
      automated match to d2m8pa2
    3. 2316794Domain d4wymc2: 4wym C:148-219 [262167]
      Other proteins in same PDB: d4wyma1, d4wymb1, d4wymc1, d4wymd1, d4wyme1, d4wymf1, d4wymg1, d4wymh1, d4wymi1, d4wymj1, d4wymk1, d4wyml1
      automated match to d2m8pa2
    4. 2316795Domain d4wymd2: 4wym D:148-219 [262161]
      Other proteins in same PDB: d4wyma1, d4wymb1, d4wymc1, d4wymd1, d4wyme1, d4wymf1, d4wymg1, d4wymh1, d4wymi1, d4wymj1, d4wymk1, d4wyml1
      automated match to d2m8pa2
    5. 2316796Domain d4wyme2: 4wym E:148-220 [262156]
      Other proteins in same PDB: d4wyma1, d4wymb1, d4wymc1, d4wymd1, d4wyme1, d4wymf1, d4wymg1, d4wymh1, d4wymi1, d4wymj1, d4wymk1, d4wyml1
      automated match to d2m8pa2
    6. 2316797Domain d4wymf2: 4wym F:148-220 [262157]
      Other proteins in same PDB: d4wyma1, d4wymb1, d4wymc1, d4wymd1, d4wyme1, d4wymf1, d4wymg1, d4wymh1, d4wymi1, d4wymj1, d4wymk1, d4wyml1
      automated match to d2m8pa2
    7. 2316798Domain d4wymg2: 4wym G:148-219 [262170]
      Other proteins in same PDB: d4wyma1, d4wymb1, d4wymc1, d4wymd1, d4wyme1, d4wymf1, d4wymg1, d4wymh1, d4wymi1, d4wymj1, d4wymk1, d4wyml1
      automated match to d2m8pa2
    8. 2316799Domain d4wymh2: 4wym H:148-219 [262173]
      Other proteins in same PDB: d4wyma1, d4wymb1, d4wymc1, d4wymd1, d4wyme1, d4wymf1, d4wymg1, d4wymh1, d4wymi1, d4wymj1, d4wymk1, d4wyml1
      automated match to d2m8pa2
    9. 2316800Domain d4wymj2: 4wym J:148-219 [262169]
      Other proteins in same PDB: d4wyma1, d4wymb1, d4wymc1, d4wymd1, d4wyme1, d4wymf1, d4wymg1, d4wymh1, d4wymi1, d4wymj1, d4wymk1, d4wyml1
      automated match to d2m8pa2
    10. 2316801Domain d4wymk2: 4wym K:148-219 [262168]
      Other proteins in same PDB: d4wyma1, d4wymb1, d4wymc1, d4wymd1, d4wyme1, d4wymf1, d4wymg1, d4wymh1, d4wymi1, d4wymj1, d4wymk1, d4wyml1
      automated match to d2m8pa2
  4. Domain(s) for 6bht:
    1. 3055352Domain d6bhta2: 6bht A:148-221 [355414]
      Other proteins in same PDB: d6bhta1, d6bhtb1, d6bhtc1, d6bhtd1, d6bhte1, d6bhtf1, d6bhtg1, d6bhth1, d6bhti1, d6bhtj1, d6bhtk1, d6bhtl1
      automated match to d2m8pa2
      complexed with ihp
    2. 3055371Domain d6bhtb2: 6bht B:148-219 [355433]
      Other proteins in same PDB: d6bhta1, d6bhtb1, d6bhtc1, d6bhtd1, d6bhte1, d6bhtf1, d6bhtg1, d6bhth1, d6bhti1, d6bhtj1, d6bhtk1, d6bhtl1
      automated match to d2m8pa2
      complexed with ihp
    3. 3055374Domain d6bhtj2: 6bht J:148-219 [355436]
      Other proteins in same PDB: d6bhta1, d6bhtb1, d6bhtc1, d6bhtd1, d6bhte1, d6bhtf1, d6bhtg1, d6bhth1, d6bhti1, d6bhtj1, d6bhtk1, d6bhtl1
      automated match to d2m8pa2
      complexed with ihp
    4. 3055378Domain d6bhtg2: 6bht G:148-219 [355440]
      Other proteins in same PDB: d6bhta1, d6bhtb1, d6bhtc1, d6bhtd1, d6bhte1, d6bhtf1, d6bhtg1, d6bhth1, d6bhti1, d6bhtj1, d6bhtk1, d6bhtl1
      automated match to d2m8pa2
      complexed with ihp
    5. 3055381Domain d6bhtk2: 6bht K:148-219 [355443]
      Other proteins in same PDB: d6bhta1, d6bhtb1, d6bhtc1, d6bhtd1, d6bhte1, d6bhtf1, d6bhtg1, d6bhth1, d6bhti1, d6bhtj1, d6bhtk1, d6bhtl1
      automated match to d2m8pa2
      complexed with ihp
    6. 3055385Domain d6bhtc2: 6bht C:148-219 [355447]
      Other proteins in same PDB: d6bhta1, d6bhtb1, d6bhtc1, d6bhtd1, d6bhte1, d6bhtf1, d6bhtg1, d6bhth1, d6bhti1, d6bhtj1, d6bhtk1, d6bhtl1
      automated match to d2m8pa2
      complexed with ihp
    7. 3055387Domain d6bhtf2: 6bht F:148-221 [355449]
      Other proteins in same PDB: d6bhta1, d6bhtb1, d6bhtc1, d6bhtd1, d6bhte1, d6bhtf1, d6bhtg1, d6bhth1, d6bhti1, d6bhtj1, d6bhtk1, d6bhtl1
      automated match to d2m8pa2
      complexed with ihp
    8. 3055507Domain d6bhti2: 6bht I:148-221 [355569]
      Other proteins in same PDB: d6bhta1, d6bhtb1, d6bhtc1, d6bhtd1, d6bhte1, d6bhtf1, d6bhtg1, d6bhth1, d6bhti1, d6bhtj1, d6bhtk1, d6bhtl1
      automated match to d2m8pa2
      complexed with ihp
    9. 3055510Domain d6bhtl2: 6bht L:148-219 [355572]
      Other proteins in same PDB: d6bhta1, d6bhtb1, d6bhtc1, d6bhtd1, d6bhte1, d6bhtf1, d6bhtg1, d6bhth1, d6bhti1, d6bhtj1, d6bhtk1, d6bhtl1
      automated match to d2m8pa2
      complexed with ihp
    10. 3055513Domain d6bhte2: 6bht E:148-220 [355575]
      Other proteins in same PDB: d6bhta1, d6bhtb1, d6bhtc1, d6bhtd1, d6bhte1, d6bhtf1, d6bhtg1, d6bhth1, d6bhti1, d6bhtj1, d6bhtk1, d6bhtl1
      automated match to d2m8pa2
      complexed with ihp
    11. 3055516Domain d6bhth2: 6bht H:148-221 [355578]
      Other proteins in same PDB: d6bhta1, d6bhtb1, d6bhtc1, d6bhtd1, d6bhte1, d6bhtf1, d6bhtg1, d6bhth1, d6bhti1, d6bhtj1, d6bhtk1, d6bhtl1
      automated match to d2m8pa2
      complexed with ihp
    12. 3055606Domain d6bhtd2: 6bht D:148-219 [355668]
      Other proteins in same PDB: d6bhta1, d6bhtb1, d6bhtc1, d6bhtd1, d6bhte1, d6bhtf1, d6bhtg1, d6bhth1, d6bhti1, d6bhtj1, d6bhtk1, d6bhtl1
      automated match to d2m8pa2
      complexed with ihp
  5. Domain(s) for 6h09:

More info for Species Human immunodeficiency virus type 1 group m subtype b [TaxId:11698] from a.28.3.0 automated matches

Timeline for Species Human immunodeficiency virus type 1 group m subtype b [TaxId:11698] from a.28.3.0 automated matches: