SCOPe 2.07: Domain d4mkka_: 4mkk A:

Lineage for d4mkka_ (4mkk A:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.3: Cystathionine synthase-like [53402] (17 proteins)

6. Protein Methionine gamma-lyase, MGL [64126] (4 species)

7. Species Citrobacter freundii [TaxId:546] [142663] (9 PDB entries)
   Uniprot Q84AR1 2-398

8. Domain d4mkka_: 4mkk A: [260901]
   automated match to d3mkja_
   complexed with cl, k, na, pge; mutant

Details for d4mkka_

PDB Entry: 4mkk, 1.45 Å

PDB Description: Crystal structure of C115A mutant L-methionine gamma-lyase from Citrobacter freundii modified by allicine

PDB Compounds: (A:) methionine gamma-lyase

SCOPe Domain Sequences for d4mkka_:

Sequence, based on SEQRES records:

>d4mkka_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}
sdxrtygfntqivhagqqpdpstgalstpifqtstfvfdsaeqgaarfaleesgyiytrl
gnpttdalekklavlergeaglatasgisaitttlltlcqqgdhivsasaiygathafls
hsmpkfginvsfvdaakpeeiraamrpetkvvyietpanptlslvdietvagiahqqgal
lvvdntfmspycqqplqlgadivvhsvtkyinghgdviggiivgkqefidqarfvglkdi
tggxmspfnawltlrgvktlgirmerhcenalkiarfleghpsitrvyypglsshpqyel
gqrqmslpggiisfeiaggleagrrminsvelcllavslgdtetliqhpasmthspvape
erlkagitdglirlsvgledpediindlehairkat

Sequence, based on observed residues (ATOM records):

>d4mkka_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}
sdxrtygfntqivhagqqpdpstgalstpifqtstfvfdsaeqgaarfytrlgnpttdal
ekklavlergeaglatasgisaitttlltlcqqgdhivsasaiygathaflshsmpkfgi
nvsfvdaakpeeiraamrpetkvvyietpanptlslvdietvagiahqqgallvvdntfm
spycqqplqlgadivvhsvtkyinghgdviggiivgkqefidqarfvglkditggxmspf
nawltlrgvktlgirmerhcenalkiarfleghpsitrvyypglsshpqyelgqrqmslp
ggiisfeiaggleagrrminsvelcllavslgdtetliqhpasmthspvapeerlkagit
dglirlsvgledpediindlehairkat

Timeline for d4mkka_:

• d4mkka_ first appeared in SCOPe 2.04
  
• d4mkka_ appears in SCOPe 2.06
  
• d4mkka_ appears in the current release, SCOPe 2.08