SCOPe 2.05: Domain d4mkja_: 4mkj A:

Lineage for d4mkja_ (4mkj A:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.3: Cystathionine synthase-like [53402] (17 proteins)

6. Protein Methionine gamma-lyase, MGL [64126] (4 species)

7. Species Citrobacter freundii [TaxId:546] [142663] (9 PDB entries)
   Uniprot Q84AR1 2-398

8. Domain d4mkja_: 4mkj A: [260898]
   automated match to d3mkja_
   complexed with 1pe, na, pge

Details for d4mkja_

PDB Entry: 4mkj, 1.85 Å

PDB Description: Crystal structure of L-methionine gamma-lyase from Citrobacter freundii modified by allicine

PDB Compounds: (A:) methionine gamma-lyase

SCOPe Domain Sequences for d4mkja_:

Sequence, based on SEQRES records:

>d4mkja_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}
sdxrtygfntqivhagqqpdpstgalstpifqtstfvfdsaeqgaarfaleesgyiytrl
gnpttdalekklavlergeaglatasgisaitttlltlcqqgdhivsasaiygxthafls
hsmpkfginvsfvdaakpeeiraamrpetkvvyietpanptlslvdietvagiahqqgal
lvvdntfmspycqqplqlgadivvhsvtkyinghgdviggiivgkqefidqarfvglkdi
tggxmspfnawltlrgvktlgirmerhcenalkiarfleghpsitrvyypglsshpqyel
gqrqmslpggiisfeiaggleagrrminsvelcllavslgdtetliqhpasmthspvape
erlkagitdglirlsvgledpediindlehairkat

Sequence, based on observed residues (ATOM records):

>d4mkja_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}
sdxrtygfntqivhagqqpdpstgalstpifqtstfvfdsaeqgaarfytrlgnpttdal
ekklavlergeaglatasgisaitttlltlcqqgdhivsasaiygxthaflshsmpkfgi
nvsfvdaakpeeiraamrpetkvvyietpanptlslvdietvagiahqqgallvvdntfm
spycqqplqlgadivvhsvtkyinghgdviggiivgkqefidqarfvglkditggxmspf
nawltlrgvktlgirmerhcenalkiarfleghpsitrvyypglsshpqyelgqrqmslp
ggiisfeiaggleagrrminsvelcllavslgdtetliqhpasmthspvapeerlkagit
dglirlsvgledpediindlehairkat

Timeline for d4mkja_:

• d4mkja_ first appeared in SCOPe 2.04
  
• d4mkja_ appears in SCOPe 2.06
  
• d4mkja_ appears in the current release, SCOPe 2.08