Lineage for d4pj0d_ (4pj0 D:)

  1. Root: SCOPe 2.07
  2. 2575216Class f: Membrane and cell surface proteins and peptides [56835] (60 folds)
  3. 2579766Fold f.26: Bacterial photosystem II reaction centre, L and M subunits [81484] (1 superfamily)
    five transmembrane helices forming a sheet-like structure
  4. 2579767Superfamily f.26.1: Bacterial photosystem II reaction centre, L and M subunits [81483] (1 family) (S)
    automatically mapped to Pfam PF00124
  5. 2579768Family f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits [81482] (5 proteins)
    L and M are probably related to each other
  6. 2579948Protein Photosystem II reaction center d2 protein PsbD2 [161051] (2 species)
  7. 2579949Species Thermosynechococcus elongatus [TaxId:146786] [161052] (2 PDB entries)
    Uniprot Q8CM25 13-352
  8. 2579950Domain d4pj0d_: 4pj0 D: [260542]
    Other proteins in same PDB: d4pj0a_, d4pj0b_, d4pj0c_, d4pj0e_, d4pj0f_, d4pj0h_, d4pj0i_, d4pj0j_, d4pj0l_, d4pj0m_, d4pj0o_, d4pj0t_, d4pj0u_, d4pj0v_, d4pj0x_, d4pj0z_
    automated match to d2axtd1
    complexed with bcr, bct, cl, cla, dgd, fe, hem, lhg, lmg, oex, pho, pl9, so4, sqd, unl

Details for d4pj0d_

PDB Entry: 4pj0 (more details), 2.44 Å

PDB Description: Structure of T.elongatus Photosystem II, rows of dimers crystal packing
PDB Compounds: (D:) Photosystem II D2 protein

SCOPe Domain Sequences for d4pj0d_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4pj0d_ f.26.1.1 (D:) Photosystem II reaction center d2 protein PsbD2 {Thermosynechococcus elongatus [TaxId: 146786]}
gwfdilddwlkrdrfvfvgwsgillfpcaylalggwltgttfvtswythglassylegcn
fltvavstpansmghsllllwgpeaqgdftrwcqlgglwtfialhgafgligfmlrqfei
arlvgvrpynaiafsapiavfvsvfliyplgqsswffapsfgvaaifrfllffqgfhnwt
lnpfhmmgvagvlggallcaihgatventlfqdgegastfrafnptqaeetysmvtanrf
wsqifgiafsnkrwlhffmlfvpvtglwmsaigvvglalnlrsydfisqeiraaedpefe
tfytknlllnegirawmapqdqphenfvfpeevlprgnal

SCOPe Domain Coordinates for d4pj0d_:

Click to download the PDB-style file with coordinates for d4pj0d_.
(The format of our PDB-style files is described here.)

Timeline for d4pj0d_: