Lineage for Species: Agrobacterium tumefaciens [TaxId: 176299]

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2144291Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 2144292Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 2145531Family c.94.1.0: automated matches [191309] (1 protein)
    not a true family
  6. 2145532Protein automated matches [190039] (138 species)
    not a true protein
  7. 2145566Species Agrobacterium tumefaciens [TaxId:176299] [260526] (5 PDB entries)

PDB entries in Species: Agrobacterium tumefaciens [TaxId: 176299]:

  1. Domain(s) for 4p0i:
    1. 2145571Domain d4p0ia_: 4p0i A: [260527]
      automated match to d2m8ca_
      complexed with edo, peg
    2. 2145572Domain d4p0ib_: 4p0i B: [260532]
      automated match to d2m8ca_
      complexed with edo, peg
  2. Domain(s) for 4pow:
    1. 2145567Domain d4powa_: 4pow A: [260742]
      automated match to d2m8ca_
      complexed with edo, op1
    2. 2145568Domain d4powb_: 4pow B: [263559]
      automated match to d4p0ib_
      complexed with edo, op1
  3. Domain(s) for 4pox:
    1. 2145573Domain d4poxa_: 4pox A: [267196]
      automated match to d4p0ib_
      complexed with 15p, 2w2, edo, peg
    2. 2145574Domain d4poxb_: 4pox B: [267197]
      automated match to d4p0ib_
      complexed with 15p, 2w2, edo, peg
  4. Domain(s) for 4pp0:
    1. 2145569Domain d4pp0a_: 4pp0 A: [260561]
      automated match to d1hsla_
      complexed with edo, op1, peg
    2. 2145570Domain d4pp0b_: 4pp0 B: [260747]
      automated match to d1hsla_
      complexed with edo, op1, peg
  5. Domain(s) for 5ito:
    1. 2283334Domain d5itoa_: 5ito A: [326635]
      automated match to d4p0ib_
      complexed with 1pe, 6db, edo, peg, toe
    2. 2283409Domain d5itob_: 5ito B: [326710]
      automated match to d4p0ib_
      complexed with 1pe, 6db, edo, peg, toe

More info for Species Agrobacterium tumefaciens [TaxId:176299] from c.94.1.0 automated matches

Timeline for Species Agrobacterium tumefaciens [TaxId:176299] from c.94.1.0 automated matches: