Lineage for d4q5sf3 (4q5s F:319-422)

  1. Root: SCOPe 2.05
  2. 1715731Class a: All alpha proteins [46456] (286 folds)
  3. 1720410Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 1723765Superfamily a.4.13: Sigma3 and sigma4 domains of RNA polymerase sigma factors [88659] (4 families) (S)
  5. 1723861Family a.4.13.0: automated matches [254211] (1 protein)
    not a true family
  6. 1723862Protein automated matches [254475] (3 species)
    not a true protein
  7. 1723881Species Thermus thermophilus [TaxId:300852] [257268] (3 PDB entries)
  8. 1723887Domain d4q5sf3: 4q5s F:319-422 [259969]
    Other proteins in same PDB: d4q5sc_, d4q5sd_, d4q5se_, d4q5sf1
    automated match to d1smyf2
    protein/DNA complex; protein/RNA complex; complexed with atp, mg, zn

Details for d4q5sf3

PDB Entry: 4q5s (more details), 3 Å

PDB Description: Thermus thermophilus RNA polymerase initially transcribing complex containing 6-mer RNA
PDB Compounds: (F:) RNA polymerase sigma factor SigA

SCOPe Domain Sequences for d4q5sf3:

Sequence, based on SEQRES records: (download)

>d4q5sf3 a.4.13.0 (F:319-422) automated matches {Thermus thermophilus [TaxId: 300852]}

Sequence, based on observed residues (ATOM records): (download)

>d4q5sf3 a.4.13.0 (F:319-422) automated matches {Thermus thermophilus [TaxId: 300852]}

SCOPe Domain Coordinates for d4q5sf3:

Click to download the PDB-style file with coordinates for d4q5sf3.
(The format of our PDB-style files is described here.)

Timeline for d4q5sf3: