SCOPe 2.04: Domain d4tv9d2: 4tv9 D:246-441

Lineage for d4tv9d2 (4tv9 D:246-441)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
   core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest

4. Superfamily d.79.2: Tubulin C-terminal domain-like [55307] (2 families)

5. Family d.79.2.1: Tubulin, C-terminal domain [55308] (4 proteins)

6. Protein automated matches [227071] (2 species)
   not a true protein

7. Species Cow (Bos taurus) [TaxId:9913] [226565] (14 PDB entries)

8. Domain d4tv9d2: 4tv9 D:246-441 [259547]
   Other proteins in same PDB: d4tv9a1, d4tv9d1, d4tv9e_
   automated match to d3rycd2
   complexed with 3h4, acp, ca, gdp, gol, gtp, mes, mg

Details for d4tv9d2

PDB Entry: 4tv9, 2 Å

PDB Description: Tubulin-PM060184 complex

PDB Compounds: (D:) Tubulin beta-2B chain

SCOPe Domain Sequences for d4tv9d2:

Sequence, based on SEQRES records:

>d4tv9d2 d.79.2.1 (D:246-441) automated matches {Cow (Bos taurus) [TaxId: 9913]}
gqlnadlrklavnmvpfprlhffmpgfapltsrgsqqyraltvpeltqqmfdsknmmaac
dprhgryltvaaifrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprglkm
satfignstaiqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvseyq
qyqdatad

Sequence, based on observed residues (ATOM records):

>d4tv9d2 d.79.2.1 (D:246-441) automated matches {Cow (Bos taurus) [TaxId: 9913]}
gqlnadlrklavnmvpfprlhffmpgfaplltvpeltqqmfdsknmmaacdprhgryltv
aaifrgrmsmkevdeqmlnvqnknssyfvewipnnvktavcdipprglkmsatfignsta
iqelfkriseqftamfrrkaflhwytgegmdemefteaesnmndlvseyqqyqdatad

Timeline for d4tv9d2:

• d4tv9d2 is new in SCOPe 2.04-stable
  
• d4tv9d2 appears in SCOPe 2.05
  
• d4tv9d2 appears in the current release, SCOPe 2.08