Lineage for Species: Zebrafish (Danio rerio) [TaxId: 7955]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1998252Fold a.53: p53 tetramerization domain [47718] (1 superfamily)
    core: 4 helices; bundle
  4. 1998253Superfamily a.53.1: p53 tetramerization domain [47719] (2 families) (S)
    homotetramer
  5. 1998314Family a.53.1.0: automated matches [259188] (1 protein)
    not a true family
  6. 1998315Protein automated matches [259190] (2 species)
    not a true protein
  7. 1998318Species Zebrafish (Danio rerio) [TaxId:7955] [259192] (5 PDB entries)

PDB entries in Species: Zebrafish (Danio rerio) [TaxId: 7955]:

  1. Domain(s) for 4cz5:
    1. 1998319Domain d4cz5a_: 4cz5 A: [266112]
      Other proteins in same PDB: d4cz5c2
      automated match to d4cz7b_
    2. 1998320Domain d4cz5b_: 4cz5 B: [266113]
      Other proteins in same PDB: d4cz5c2
      automated match to d4cz7b_
    3. 1998321Domain d4cz5c1: 4cz5 C:302-331 [266114]
      Other proteins in same PDB: d4cz5c2
      automated match to d4cz7b_
    4. 1998322Domain d4cz5d_: 4cz5 D: [266115]
      Other proteins in same PDB: d4cz5c2
      automated match to d4cz7b_
  2. Domain(s) for 4cz6:
    1. 1998329Domain d4cz6a1: 4cz6 A:302-330 [266116]
      Other proteins in same PDB: d4cz6a2, d4cz6d2
      automated match to d4cz7b_
      complexed with peg
    2. 1998330Domain d4cz6b_: 4cz6 B: [266117]
      Other proteins in same PDB: d4cz6a2, d4cz6d2
      automated match to d4cz7b_
      complexed with peg
    3. 1998331Domain d4cz6c_: 4cz6 C: [266118]
      Other proteins in same PDB: d4cz6a2, d4cz6d2
      automated match to d4cz7b_
      complexed with peg
    4. 1998332Domain d4cz6d1: 4cz6 D:302-331 [266119]
      Other proteins in same PDB: d4cz6a2, d4cz6d2
      automated match to d4cz7b_
      complexed with peg
  3. Domain(s) for 4cz7:
    1. 1998323Domain d4cz7a_: 4cz7 A: [259194]
      Other proteins in same PDB: d4cz7b2, d4cz7c2, d4cz7d2, d4cz7e2, d4cz7f2
      automated match to d3saka_
      complexed with gol, po4
    2. 1998324Domain d4cz7b1: 4cz7 B:302-331 [259195]
      Other proteins in same PDB: d4cz7b2, d4cz7c2, d4cz7d2, d4cz7e2, d4cz7f2
      automated match to d3saka_
      complexed with gol, po4
    3. 1998325Domain d4cz7c1: 4cz7 C:302-331 [259651]
      Other proteins in same PDB: d4cz7b2, d4cz7c2, d4cz7d2, d4cz7e2, d4cz7f2
      automated match to d3saka_
      complexed with gol, po4
    4. 1998326Domain d4cz7d1: 4cz7 D:302-331 [262674]
      Other proteins in same PDB: d4cz7b2, d4cz7c2, d4cz7d2, d4cz7e2, d4cz7f2
      automated match to d4cz7b_
      complexed with gol, po4
    5. 1998327Domain d4cz7e1: 4cz7 E:302-329 [262675]
      Other proteins in same PDB: d4cz7b2, d4cz7c2, d4cz7d2, d4cz7e2, d4cz7f2
      automated match to d4cz7b_
      complexed with gol, po4
    6. 1998328Domain d4cz7f1: 4cz7 F:302-331 [262676]
      Other proteins in same PDB: d4cz7b2, d4cz7c2, d4cz7d2, d4cz7e2, d4cz7f2
      automated match to d4cz7b_
      complexed with gol, po4
  4. Domain(s) for 4d1l:
    1. 1998333Domain d4d1la_: 4d1l A: [262686]
      automated match to d4d1lb_
      complexed with zn
    2. 1998334Domain d4d1lb_: 4d1l B: [259196]
      automated match to d3saka_
      complexed with zn
    3. 1998335Domain d4d1lc_: 4d1l C: [262687]
      automated match to d4d1lb_
      complexed with zn
    4. 1998336Domain d4d1ld_: 4d1l D: [262688]
      automated match to d4d1lb_
      complexed with zn
    5. 1998337Domain d4d1le_: 4d1l E: [262689]
      automated match to d4d1lb_
      complexed with zn
    6. 1998338Domain d4d1lf_: 4d1l F: [262690]
      automated match to d4d1lb_
      complexed with zn
  5. Domain(s) for 4d1m:
    1. 1998339Domain d4d1ma_: 4d1m A: [266142]
      automated match to d4d1lb_
      complexed with zn
    2. 1998340Domain d4d1mb_: 4d1m B: [266143]
      automated match to d4d1lb_
      complexed with zn
    3. 1998341Domain d4d1mc_: 4d1m C: [266144]
      automated match to d4d1lb_
      complexed with zn
    4. 1998342Domain d4d1md_: 4d1m D: [266145]
      automated match to d4d1lb_
      complexed with zn
    5. 1998343Domain d4d1me_: 4d1m E: [266146]
      automated match to d4d1lb_
      complexed with zn
    6. 1998344Domain d4d1mf_: 4d1m F: [266147]
      automated match to d4d1lb_
      complexed with zn
    7. 1998345Domain d4d1mg_: 4d1m G: [266148]
      automated match to d4d1lb_
      complexed with zn
    8. 1998346Domain d4d1mh_: 4d1m H: [266149]
      automated match to d4d1lb_
      complexed with zn
    9. 1998347Domain d4d1mi_: 4d1m I: [266150]
      automated match to d4d1lb_
      complexed with zn
    10. 1998348Domain d4d1mj_: 4d1m J: [266151]
      automated match to d4d1lb_
      complexed with zn
    11. 1998349Domain d4d1mk_: 4d1m K: [266152]
      automated match to d4d1lb_
      complexed with zn
    12. 1998350Domain d4d1ml_: 4d1m L: [266153]
      automated match to d4d1lb_
      complexed with zn

More info for Species Zebrafish (Danio rerio) [TaxId:7955] from a.53.1.0 automated matches

Timeline for Species Zebrafish (Danio rerio) [TaxId:7955] from a.53.1.0 automated matches: