Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2323790Fold a.53: p53 tetramerization domain [47718] (1 superfamily)
    core: 4 helices; bundle
  4. 2323791Superfamily a.53.1: p53 tetramerization domain [47719] (2 families) (S)
    homotetramer
  5. 2323852Family a.53.1.0: automated matches [259188] (1 protein)
    not a true family
  6. 2323853Protein automated matches [259190] (2 species)
    not a true protein

Species:

  1. 2323854Human (Homo sapiens) [TaxId:9606] [311354] (9 PDB entries)
    1. Domains for 2kby:
      1. 2323882Domain d2kbyc_: 2kby C: [344601]
        automated match to d5hobg_
      2. 2323883Domain d2kbyd_: 2kby D: [344602]
        automated match to d5hobg_
    2. Domains for 2nb1:
      1. 2323884Domain d2nb1a1: 2nb1 A:2-60 [327071]
        Other proteins in same PDB: d2nb1a2, d2nb1b2, d2nb1c2, d2nb1d2
        automated match to d3zy1a_
      2. 2323885Domain d2nb1b1: 2nb1 B:95-142 [343701]
        Other proteins in same PDB: d2nb1a2, d2nb1b2, d2nb1c2, d2nb1d2
        automated match to d5hobg_
      3. 2323886Domain d2nb1c1: 2nb1 C:1002-1060 [327015]
        Other proteins in same PDB: d2nb1a2, d2nb1b2, d2nb1c2, d2nb1d2
        automated match to d3zy1a_
      4. 2323887Domain d2nb1d1: 2nb1 D:1095-1142 [343703]
        Other proteins in same PDB: d2nb1a2, d2nb1b2, d2nb1c2, d2nb1d2
        automated match to d5hobg_
    3. Domains for 2wqi:
      1. 2323865Domain d2wqic_: 2wqi C: [344659]
        automated match to d5hobg_
      2. 2323866Domain d2wqid_: 2wqi D: [344660]
        automated match to d5hobg_
    4. Domains for 2wtt:
      1. 2323875Domain d2wtta_: 2wtt A: [344661]
        automated match to d5hobg_
      2. 2323876Domain d2wttb_: 2wtt B: [344662]
        automated match to d5hobg_
      3. 2323877Domain d2wttc_: 2wtt C: [344663]
        automated match to d5hobg_
      4. 2323878Domain d2wttd_: 2wtt D: [344664]
        automated match to d5hobg_
      5. 2323879Domain d2wtte_: 2wtt E: [344665]
        automated match to d5hobg_
      6. 2323880Domain d2wttf_: 2wtt F: [344666]
        automated match to d5hobg_
      7. 2323881Domain d2wttn_: 2wtt N: [344667]
        automated match to d5hobg_
    5. Domains for 3zy0:
      1. 2323867Domain d3zy0a_: 3zy0 A: [345055]
        automated match to d3zy1a_
      2. 2323868Domain d3zy0b_: 3zy0 B: [345056]
        automated match to d3zy1a_
      3. 2323869Domain d3zy0c_: 3zy0 C: [345057]
        automated match to d3zy1a_
      4. 2323870Domain d3zy0d_: 3zy0 D: [345058]
        automated match to d3zy1a_
    6. Domain for 3zy1:
    7. Domains for 4a9z:
      1. 2323872Domain d4a9za_: 4a9z A: [345059]
        automated match to d3zy1a_
        complexed with pe4
      2. 2323873Domain d4a9zb_: 4a9z B: [345060]
        automated match to d3zy1a_
        complexed with pe4
      3. 2323874Domain d4a9zd_: 4a9z D: [345061]
        automated match to d3zy1a_
        complexed with pe4
    8. Domains for 5hob:
      1. 2323855Domain d5hoba_: 5hob A: [324180]
        Other proteins in same PDB: d5hobe2, d5hobh2
        automated match to d3zy1a_
        complexed with mg; mutant
      2. 2323856Domain d5hobb_: 5hob B: [324178]
        Other proteins in same PDB: d5hobe2, d5hobh2
        automated match to d3zy1a_
        complexed with mg; mutant
      3. 2323857Domain d5hobc_: 5hob C: [324197]
        Other proteins in same PDB: d5hobe2, d5hobh2
        automated match to d3zy1a_
        complexed with mg; mutant
      4. 2323858Domain d5hobd_: 5hob D: [324182]
        Other proteins in same PDB: d5hobe2, d5hobh2
        automated match to d3zy1a_
        complexed with mg; mutant
      5. 2323859Domain d5hobe1: 5hob E:351-396 [324187]
        Other proteins in same PDB: d5hobe2, d5hobh2
        automated match to d3zy1a_
        complexed with mg; mutant
      6. 2323860Domain d5hobf_: 5hob F: [324195]
        Other proteins in same PDB: d5hobe2, d5hobh2
        automated match to d3zy1a_
        complexed with mg; mutant
      7. 2323861Domain d5hobg_: 5hob G: [324209]
        Other proteins in same PDB: d5hobe2, d5hobh2
        automated match to d3zy1a_
        complexed with mg; mutant
      8. 2323862Domain d5hobh1: 5hob H:351-394 [324198]
        Other proteins in same PDB: d5hobe2, d5hobh2
        automated match to d3zy1a_
        complexed with mg; mutant
    9. Domains for 5hoc:
      1. 2323863Domain d5hoca_: 5hoc A: [324192]
        automated match to d3zy1a_
        mutant
      2. 2323864Domain d5hocb_: 5hoc B: [324193]
        automated match to d3zy1a_
        mutant
  2. 2323888Zebrafish (Danio rerio) [TaxId:7955] [259192] (5 PDB entries)
    1. Domains for 4cz5:
      1. 2323889Domain d4cz5a_: 4cz5 A: [266112]
        Other proteins in same PDB: d4cz5c2
        automated match to d4cz7b_
      2. 2323890Domain d4cz5b_: 4cz5 B: [266113]
        Other proteins in same PDB: d4cz5c2
        automated match to d4cz7b_
      3. 2323891Domain d4cz5c1: 4cz5 C:302-331 [266114]
        Other proteins in same PDB: d4cz5c2
        automated match to d4cz7b_
      4. 2323892Domain d4cz5d_: 4cz5 D: [266115]
        Other proteins in same PDB: d4cz5c2
        automated match to d4cz7b_
    2. Domains for 4cz6:
      1. 2323899Domain d4cz6a1: 4cz6 A:302-330 [266116]
        Other proteins in same PDB: d4cz6a2, d4cz6d2
        automated match to d4cz7b_
        complexed with peg
      2. 2323900Domain d4cz6b_: 4cz6 B: [266117]
        Other proteins in same PDB: d4cz6a2, d4cz6d2
        automated match to d4cz7b_
        complexed with peg
      3. 2323901Domain d4cz6c_: 4cz6 C: [266118]
        Other proteins in same PDB: d4cz6a2, d4cz6d2
        automated match to d4cz7b_
        complexed with peg
      4. 2323902Domain d4cz6d1: 4cz6 D:302-331 [266119]
        Other proteins in same PDB: d4cz6a2, d4cz6d2
        automated match to d4cz7b_
        complexed with peg
    3. Domains for 4cz7:
      1. 2323893Domain d4cz7a_: 4cz7 A: [259194]
        Other proteins in same PDB: d4cz7b2, d4cz7c2, d4cz7d2, d4cz7e2, d4cz7f2
        automated match to d3saka_
        complexed with gol, po4
      2. 2323894Domain d4cz7b1: 4cz7 B:302-331 [259195]
        Other proteins in same PDB: d4cz7b2, d4cz7c2, d4cz7d2, d4cz7e2, d4cz7f2
        automated match to d3saka_
        complexed with gol, po4
      3. 2323895Domain d4cz7c1: 4cz7 C:302-331 [259651]
        Other proteins in same PDB: d4cz7b2, d4cz7c2, d4cz7d2, d4cz7e2, d4cz7f2
        automated match to d3saka_
        complexed with gol, po4
      4. 2323896Domain d4cz7d1: 4cz7 D:302-331 [262674]
        Other proteins in same PDB: d4cz7b2, d4cz7c2, d4cz7d2, d4cz7e2, d4cz7f2
        automated match to d4cz7b_
        complexed with gol, po4
      5. 2323897Domain d4cz7e1: 4cz7 E:302-329 [262675]
        Other proteins in same PDB: d4cz7b2, d4cz7c2, d4cz7d2, d4cz7e2, d4cz7f2
        automated match to d4cz7b_
        complexed with gol, po4
      6. 2323898Domain d4cz7f1: 4cz7 F:302-331 [262676]
        Other proteins in same PDB: d4cz7b2, d4cz7c2, d4cz7d2, d4cz7e2, d4cz7f2
        automated match to d4cz7b_
        complexed with gol, po4
    4. Domains for 4d1l:
      1. 2323903Domain d4d1la_: 4d1l A: [262686]
        automated match to d4d1lb_
        complexed with zn
      2. 2323904Domain d4d1lb_: 4d1l B: [259196]
        automated match to d3saka_
        complexed with zn
      3. 2323905Domain d4d1lc_: 4d1l C: [262687]
        automated match to d4d1lb_
        complexed with zn
      4. 2323906Domain d4d1ld_: 4d1l D: [262688]
        automated match to d4d1lb_
        complexed with zn
      5. 2323907Domain d4d1le_: 4d1l E: [262689]
        automated match to d4d1lb_
        complexed with zn
      6. 2323908Domain d4d1lf_: 4d1l F: [262690]
        automated match to d4d1lb_
        complexed with zn
    5. Domains for 4d1m:
      1. 2323909Domain d4d1ma_: 4d1m A: [266142]
        automated match to d4d1lb_
        complexed with zn
      2. 2323910Domain d4d1mb_: 4d1m B: [266143]
        automated match to d4d1lb_
        complexed with zn
      3. 2323911Domain d4d1mc_: 4d1m C: [266144]
        automated match to d4d1lb_
        complexed with zn
      4. 2323912Domain d4d1md_: 4d1m D: [266145]
        automated match to d4d1lb_
        complexed with zn
      5. 2323913Domain d4d1me_: 4d1m E: [266146]
        automated match to d4d1lb_
        complexed with zn
      6. 2323914Domain d4d1mf_: 4d1m F: [266147]
        automated match to d4d1lb_
        complexed with zn
      7. 2323915Domain d4d1mg_: 4d1m G: [266148]
        automated match to d4d1lb_
        complexed with zn
      8. 2323916Domain d4d1mh_: 4d1m H: [266149]
        automated match to d4d1lb_
        complexed with zn
      9. 2323917Domain d4d1mi_: 4d1m I: [266150]
        automated match to d4d1lb_
        complexed with zn
      10. 2323918Domain d4d1mj_: 4d1m J: [266151]
        automated match to d4d1lb_
        complexed with zn
      11. 2323919Domain d4d1mk_: 4d1m K: [266152]
        automated match to d4d1lb_
        complexed with zn
      12. 2323920Domain d4d1ml_: 4d1m L: [266153]
        automated match to d4d1lb_
        complexed with zn

More info for Protein automated matches from a.53.1.0: automated matches

Timeline for Protein automated matches from a.53.1.0: automated matches: