SCOPe 2.08: Domain d4copb_: 4cop B:

Lineage for d4copb_ (4cop B:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.28: Acyl carrier protein-like [47335] (3 superfamilies)
   4 helices, bundle; helix 3 is shorter than others; up-and-down

4. Superfamily a.28.3: Retrovirus capsid dimerization domain-like [47353] (3 families)

5. Family a.28.3.1: Retrovirus capsid protein C-terminal domain [47354] (5 proteins)

6. Protein automated matches [226861] (4 species)
   not a true protein

7. Species Human immunodeficiency virus 1 [TaxId:11676] [224990] (6 PDB entries)

8. Domain d4copb_: 4cop B: [259185]
   automated match to d2xt1a_
   mutant

Details for d4copb_

PDB Entry: 4cop, 1.85 Å

PDB Description: hiv-1 capsid c-terminal domain mutant (y169s)

PDB Compounds: (B:) capsid protein p24

SCOPe Domain Sequences for d4copb_:

Sequence, based on SEQRES records:

>d4copb_ a.28.3.1 (B:) automated matches {Human immunodeficiency virus 1 [TaxId: 11676]}
sildirqgpkepfrdyvdrfsktlraeqasqevknwmtetllvqnanpdcktilkalgpg
atleemmtacq

Sequence, based on observed residues (ATOM records):

>d4copb_ a.28.3.1 (B:) automated matches {Human immunodeficiency virus 1 [TaxId: 11676]}
sildirqgpkepfrdyvdrfsktlraeqasqevknwmtetllvqnanpdcktilkalatl
eemmtacq

Timeline for d4copb_:

• d4copb_ first appeared in SCOPe 2.04
  
• d4copb_ appears in SCOPe 2.07