Lineage for d4lyli_ (4lyl I:)

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1586283Fold c.18: Uracil-DNA glycosylase-like [52140] (1 superfamily)
    3 layers, a/b/a; core: parallel beta-sheet of 4 strands, order 2134
  4. 1586284Superfamily c.18.1: Uracil-DNA glycosylase-like [52141] (5 families) (S)
  5. 1586285Family c.18.1.1: Uracil-DNA glycosylase [52142] (2 proteins)
  6. 1586286Protein Uracil-DNA glycosylase [52143] (5 species)
  7. 1586287Species Atlantic cod (Gadus morhua) [TaxId:8049] [102212] (2 PDB entries)
  8. 1586294Domain d4lyli_: 4lyl I: [258933]
    Other proteins in same PDB: d4lylb_, d4lyld_, d4lylf_, d4lylh_, d4lylj_, d4lyll_, d4lyln_, d4lylp_
    automated match to d1okba_
    protein/DNA complex

Details for d4lyli_

PDB Entry: 4lyl (more details), 1.93 Å

PDB Description: Crystal structure of uracil-DNA glycosylase from cod (Gadus morhua) in complex with the proteinaceous inhibitor UGI
PDB Compounds: (I:) uracil-DNA glycosylase

SCOPe Domain Sequences for d4lyli_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4lyli_ c.18.1.1 (I:) Uracil-DNA glycosylase {Atlantic cod (Gadus morhua) [TaxId: 8049]}
meffgetwrrelaaefekpyfkqlmsfvadersrhtvyppadqvyswtemcdiqdvkvvi
lgqdpyhgpnqahglcfsvqkpvppppslvniykelctdidgfkhpghgdlsgwakqgvl
llnavltvrahqanshkdrgwetftdavikwlsvnregvvfllwgsyahkkgatidrkrh
hvlqavhpsplsahrgflgckhfskangllklsgtepinwral

SCOPe Domain Coordinates for d4lyli_:

Click to download the PDB-style file with coordinates for d4lyli_.
(The format of our PDB-style files is described here.)

Timeline for d4lyli_:

  • d4lyli_ appears in periodic updates to SCOPe 2.04 starting on 2014-08-14
  • d4lyli_ appears in SCOPe 2.05
  • d4lyli_ appears in the current release, SCOPe 2.07, called d4lyli1